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5BTE
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BU of 5bte by Molmil
Crystal structure of Ashbya gossypii Rai1 in complex with pU(S)6-Mn2+
Descriptor: AFR263Cp, MANGANESE (II) ION, RNA (5'-R(P*UP*(U37)P*(U37)P*UP*UP*U)-3'), ...
Authors:Wang, V.Y, Tong, L.
Deposit date:2015-06-03
Release date:2015-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and biochemical studies of the distinct activity profiles of Rai1 enzymes.
Nucleic Acids Res., 43, 2015
5BTH
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BU of 5bth by Molmil
Crystal structure of Candida albicans Rai1
Descriptor: Decapping nuclease RAI1
Authors:Wang, V.Y, Tong, L.
Deposit date:2015-06-03
Release date:2015-07-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biochemical studies of the distinct activity profiles of Rai1 enzymes.
Nucleic Acids Res., 43, 2015
5BUD
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BU of 5bud by Molmil
Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+
Descriptor: Decapping nuclease RAI1, MANGANESE (II) ION, RNA (5'-R(P*UP*UP*UP*U)-3')
Authors:Wang, V.Y, Tong, L.
Deposit date:2015-06-03
Release date:2015-07-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural and biochemical studies of the distinct activity profiles of Rai1 enzymes.
Nucleic Acids Res., 43, 2015
5BTO
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BU of 5bto by Molmil
Crystal structure of Scheffersomyces stipitis Rai1
Descriptor: SsRai1
Authors:Wang, V.Y, Tong, L.
Deposit date:2015-06-03
Release date:2015-07-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Structural and biochemical studies of the distinct activity profiles of Rai1 enzymes.
Nucleic Acids Res., 43, 2015
5BTB
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BU of 5btb by Molmil
Crystal Structure of Ashbya gossypii Rai1
Descriptor: AFR263Cp, SULFATE ION
Authors:Wang, V.Y, Tong, L.
Deposit date:2015-06-02
Release date:2015-07-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biochemical studies of the distinct activity profiles of Rai1 enzymes.
Nucleic Acids Res., 43, 2015
2V2T
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BU of 2v2t by Molmil
X-ray structure of a NF-kB p50-RelB-DNA complex
Descriptor: 5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3', NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT, TRANSCRIPTION FACTOR RELB
Authors:Moorthy, A.K, Huang, D.B, Wang, V.Y, Vu, D, Ghosh, G.
Deposit date:2007-06-07
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:X-Ray Structure of a NF-kappaB p50/Relb/DNA Complex Reveals Assembly of Multiple Dimers on Tandem kappaB Sites.
J.Mol.Biol., 373, 2007
6DKN
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BU of 6dkn by Molmil
CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA DECAPPING NUCLEASE DXO1
Descriptor: Decapping nuclease DXO homolog, chloroplastic
Authors:Tong, L, Wang, V.Y.F.
Deposit date:2018-05-30
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Arabidopsis DXO1 links RNA turnover and chloroplast function independently of its enzymatic activity.
Nucleic Acids Res., 47, 2019
5U01
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BU of 5u01 by Molmil
Cooperative DNA binding by two RelA dimers
Descriptor: DNA (27-MER), Transcription factor p65
Authors:Ghosh, G, Huang, D.
Deposit date:2016-11-22
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA-binding affinity and transcriptional activity of the RelA homodimer of nuclear factor kappa B are not correlated.
J. Biol. Chem., 292, 2017
7CLI
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BU of 7cli by Molmil
Structure of NF-kB p52 homodimer bound to P-Selectin kB DNA fragment
Descriptor: DNA (5'-D(*CP*AP*AP*GP*GP*GP*GP*TP*CP*AP*CP*CP*CP*CP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*GP*GP*GP*GP*TP*GP*AP*CP*CP*CP*CP*TP*TP*G)-3'), Nuclear factor NF-kappa-B p52 subunit
Authors:Meshcheryakov, V.A, Wang, V.Y.-F.
Deposit date:2020-07-21
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation.
Elife, 12, 2023
7XA7
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BU of 7xa7 by Molmil
Crystal structure of SARS-CoV-2 receptor-binding domain in complex with intermediate horseshoe bat ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, Spike protein S1, ...
Authors:Tang, L.F, Zhang, D, Han, P, Qi, J.X.
Deposit date:2022-03-17
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Structural basis of SARS-CoV-2 and its variants binding to intermediate horseshoe bat ACE2.
Int J Biol Sci, 18, 2022
7VUP
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BU of 7vup by Molmil
Structure of NF-kB p52 homodimer bound to +1/-1 swap P-Selectin kB DNA fragment
Descriptor: DNA (5'-D(*AP*AP*GP*GP*GP*GP*GP*AP*GP*TP*CP*CP*CP*CP*TP*TP*G)-3'), DNA (5'-D(*CP*AP*AP*GP*GP*GP*GP*AP*CP*TP*CP*CP*CP*CP*CP*TP*T)-3'), Nuclear factor NF-kappa-B p52 subunit
Authors:Meshcheryakov, V.A, Wang, V.Y.-F.
Deposit date:2021-11-04
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation.
Elife, 12, 2023
7VUQ
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BU of 7vuq by Molmil
Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment
Descriptor: DNA (5'-D(*CP*AP*AP*GP*GP*GP*GP*TP*TP*AP*CP*CP*CP*CP*CP*TP*T)-3'), DNA (5'-D(*GP*AP*AP*GP*GP*GP*GP*GP*TP*AP*AP*CP*CP*CP*CP*TP*TP*G)-3'), Nuclear factor NF-kappa-B p52 subunit
Authors:Meshcheryakov, V.A, Wang, V.Y.-F.
Deposit date:2021-11-04
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation.
Elife, 12, 2023
7W7L
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BU of 7w7l by Molmil
Structure of NF-kB p52 homodimer bound to 13-mer A/T-centric P-Selectin kB DNA fragment
Descriptor: DNA (5'-D(*AP*GP*GP*GP*GP*TP*TP*AP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*GP*TP*AP*AP*CP*CP*CP*CP*T)-3'), Nuclear factor NF-kappa-B p52 subunit
Authors:Meshcheryakov, V.A, Wang, V.Y.-F.
Deposit date:2021-12-05
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of NF-kappa B p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation.
Elife, 12, 2023

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PDB entries from 2024-04-10

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