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4R04
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BU of 4r04 by Molmil
Clostridium difficile Toxin A (TcdA)
Descriptor: Toxin A, ZINC ION
Authors:Lacy, D.B, Spiller, B.W, Rutherford, S.A.
Deposit date:2014-07-29
Release date:2016-01-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.26 Å)
Cite:Glucosyl Transferase Structure
Nat Microbiol, 2016
1SHT
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BU of 1sht by Molmil
Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Descriptor: ACETATE ION, Anthrax toxin receptor 2, MAGNESIUM ION
Authors:Lacy, D.B, Wigelsworth, D.J, Scobie, H.M, Young, J.A.T, Collier, R.J.
Deposit date:2004-02-26
Release date:2004-04-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Proc.Natl.Acad.Sci.USA, 101, 2004
1SHU
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BU of 1shu by Molmil
Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Descriptor: Anthrax toxin receptor 2, MAGNESIUM ION
Authors:Lacy, D.B, Wigelsworth, D.J, Scobie, H.M, Young, J.A.T, Collier, R.J.
Deposit date:2004-02-26
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Proc.Natl.Acad.Sci.USA, 101, 2004
1TZN
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BU of 1tzn by Molmil
Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore bound to the VWA domain of CMG2, an anthrax toxin receptor
Descriptor: Anthrax toxin receptor 2, CALCIUM ION, MAGNESIUM ION, ...
Authors:Lacy, D.B, Wigelsworth, D.J, Melnyk, R.A, Collier, R.J.
Deposit date:2004-07-10
Release date:2004-08-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Structure of heptameric protective antigen bound to an anthrax toxin receptor: A role for receptor in pH-dependent pore formation
Proc.Natl.Acad.Sci.USA, 101, 2004
1TZO
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BU of 1tzo by Molmil
Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore
Descriptor: CALCIUM ION, Protective antigen
Authors:Lacy, D.B, Wigelsworth, D.J, Melnyk, R.A, Collier, R.J.
Deposit date:2004-07-10
Release date:2004-08-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of heptameric protective antigen bound to an anthrax toxin receptor: A role for receptor in pH-dependent pore formation
Proc.Natl.Acad.Sci.USA, 101, 2004
6O2N
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BU of 6o2n by Molmil
CDTb Double Heptamer Short Form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-02-24
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6O2M
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BU of 6o2m by Molmil
CDTb Double Heptamer Long Form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-02-24
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6O2O
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BU of 6o2o by Molmil
CDTb Double Heptamer Short Form Modeled from Cryo-EM Map Reconstructed using C1 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-02-24
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.53 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6OKU
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BU of 6oku by Molmil
CDTb Double Heptamer Long Form Mask 3 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-04-15
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6OKS
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BU of 6oks by Molmil
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-04-15
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6OKT
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BU of 6okt by Molmil
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-04-15
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
6OKR
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BU of 6okr by Molmil
CDTb Pre-Insertion form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Descriptor: ADP-ribosyltransferase binding component
Authors:Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
Deposit date:2019-04-15
Release date:2019-10-30
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
3BTA
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BU of 3bta by Molmil
CRYSTAL STRUCTURE OF BOTULINUM NEUROTOXIN SEROTYPE A
Descriptor: PROTEIN (BOTULINUM NEUROTOXIN TYPE A), ZINC ION
Authors:Stevens, R.C, Lacy, D.B.
Deposit date:1998-08-12
Release date:1999-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of botulinum neurotoxin type A and implications for toxicity.
Nat.Struct.Biol., 5, 1998
3SRZ
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BU of 3srz by Molmil
Clostridium difficile toxin A (TcdA) glucolsyltransferase domain bound to UDP-glucose
Descriptor: MANGANESE (II) ION, Toxin A, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Pruitt, R.N, Chumbler, N.M, Farrow, M.A, Seeback, S.A, Friedman, D.B, Spiller, B.W, Lacy, D.B.
Deposit date:2011-07-07
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural Determinants of Clostridium difficile Toxin A Glucosyltransferase Activity.
J.Biol.Chem., 287, 2012
3SS1
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BU of 3ss1 by Molmil
Clostridium difficile toxin A (TcdA) glucolsyltransferase domain
Descriptor: MANGANESE (II) ION, Toxin A
Authors:Pruitt, R.N, Chumbler, N.M, Farrow, M.A, Seeback, S.A, Friedman, D.B, Spiller, B.W, Lacy, D.B.
Deposit date:2011-07-07
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structural Determinants of Clostridium difficile Toxin A Glucosyltransferase Activity.
J.Biol.Chem., 287, 2012
6X6L
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BU of 6x6l by Molmil
Cryo-EM Structure of CagX and CagY within the dCag3 Helicobacter pylori PR
Descriptor: Cag pathogenicity island protein (Cag7), Cag pathogenicity island protein (Cag8)
Authors:Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B.
Deposit date:2020-05-28
Release date:2020-09-30
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex.
Elife, 9, 2020
6X64
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BU of 6x64 by Molmil
Legionella pneumophila Dot T4SS PR
Descriptor: Type IV secretion system unknown protein fragment
Authors:Durie, C.L, Sheedlo, M.J, Chung, J.M, Byrne, B.G, Su, M, Knight, T, Swanson, M.S, Lacy, D.B, Ohi, M.D.
Deposit date:2020-05-27
Release date:2020-10-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural analysis of the Legionella pneumophila Dot/Icm type IV secretion system core complex.
Elife, 9, 2020
6X6S
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BU of 6x6s by Molmil
Cryo-EM Structure of the Helicobacter pylori OMC
Descriptor: Cag pathogenicity island protein (Cag7), Type IV secretion system apparatus protein Cag3, Type IV secretion system apparatus protein CagM, ...
Authors:Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B.
Deposit date:2020-05-29
Release date:2020-10-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex.
Elife, 9, 2020
6V1S
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BU of 6v1s by Molmil
Structure of the Clostridioides difficile transferase toxin
Descriptor: ADP-ribosylating binary toxin enzymatic subunit CdtA, ADP-ribosyltransferase binding component, CALCIUM ION
Authors:Sheedlo, M.J, Anderson, D.M, Thomas, A.K, Lacy, D.B.
Deposit date:2019-11-21
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural elucidation of theClostridioides difficiletransferase toxin reveals a single-site binding mode for the enzyme.
Proc.Natl.Acad.Sci.USA, 117, 2020
6X6K
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BU of 6x6k by Molmil
Cryo-EM Structure of the Helicobacter pylori dCag3 OMC
Descriptor: Cag pathogenicity island protein, Cag pathogenicity island protein (Cag7), Type IV secretion system apparatus protein CagX
Authors:Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B.
Deposit date:2020-05-28
Release date:2020-10-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex.
Elife, 9, 2020
6X66
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BU of 6x66 by Molmil
Legionella pneumophila dDot T4SS OMC
Descriptor: DotC, DotD, Inner membrane lipoprotein YiaD, ...
Authors:Durie, C.L, Sheedlo, M.J, Chung, J.M, Byrne, B.G, Su, M, Knight, T, Swanson, M.S, Lacy, D.B, Ohi, M.D.
Deposit date:2020-05-27
Release date:2020-10-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural analysis of the Legionella pneumophila Dot/Icm type IV secretion system core complex.
Elife, 9, 2020
6X6J
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BU of 6x6j by Molmil
Cryo-EM Structure of CagX and CagY within the Helicobacter pylori PR
Descriptor: Cag pathogenicity island protein (Cag7), Cag pathogenicity island protein (Cag8)
Authors:Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B.
Deposit date:2020-05-28
Release date:2020-09-30
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex.
Elife, 9, 2020
6X62
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BU of 6x62 by Molmil
Legionella pneumophila Dot T4SS OMC
Descriptor: DotC, DotD, Inner membrane lipoprotein YiaD, ...
Authors:Durie, C.L, Sheedlo, M.J, Chung, J.M, Byrne, B.G, Su, M, Knight, T, Swanson, M.S, Lacy, D.B, Ohi, M.D.
Deposit date:2020-05-27
Release date:2020-09-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural analysis of the Legionella pneumophila Dot/Icm type IV secretion system core complex.
Elife, 9, 2020
6X65
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BU of 6x65 by Molmil
Legionella pneumophila Dot/Icm T4SS
Descriptor: DotC, DotD, Inner membrane lipoprotein YiaD, ...
Authors:Durie, C.L, Sheedlo, M.J, Chung, J.M, Byrne, B.G, Su, M, Knight, T, Swanson, M.S, Lacy, D.B, Ohi, M.D.
Deposit date:2020-05-27
Release date:2020-10-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural analysis of the Legionella pneumophila Dot/Icm type IV secretion system core complex.
Elife, 9, 2020
7MUV
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BU of 7muv by Molmil
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 3
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021

 

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