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5KEG
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BU of 5keg by Molmil
Crystal structure of APOBEC3A in complex with a single-stranded DNA
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*TP*TP*CP*TP*T)-3'), ...
Authors:Kouno, T, Hilbert, B.J, Silvas, T, Royer, W.E, Matsuo, H, Schiffer, C.A.
Deposit date:2016-06-09
Release date:2017-05-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of APOBEC3A bound to single-stranded DNA reveals structural basis for cytidine deamination and specificity.
Nat Commun, 8, 2017
1KLV
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BU of 1klv by Molmil
Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor associated protein
Descriptor: GABA(A) Receptor associated protein
Authors:Kouno, T, Miura, K, Tada, M, Kanematsu, T, Tate, S, Shirakawa, M, Hirata, M, Kawano, K.
Deposit date:2001-12-13
Release date:2003-10-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:1H, 13C and '5N resonance assignments of GABARAP, GABAA receptor associated protein.
J.Biomol.Nmr, 22, 2002
1KM7
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BU of 1km7 by Molmil
Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein
Descriptor: GABA(A) Receptor Associated Protein
Authors:Kouno, T, Miura, K, Tada, M, Kanematsu, T, Tate, S, Shirakawa, M, Hirata, M, Kawano, K.
Deposit date:2001-12-14
Release date:2003-10-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:1H, 13C and '5N resonance assignments of GABARAP, GABAA receptor associated protein.
J.Biomol.Nmr, 22, 2002
8H0I
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BU of 8h0i by Molmil
Cryo-EM structure of APOBEC3G-Vif complex
Descriptor: APOBEC3G, CHLORIDE ION, Core binding factor beta, ...
Authors:Kouno, T, Shibata, S, Hyun, J, Kim, T.G, Wolf, M.
Deposit date:2022-09-29
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insights into RNA bridging between HIV-1 Vif and antiviral factor APOBEC3G.
Nat Commun, 14, 2023
8J62
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BU of 8j62 by Molmil
Cryo-EM structure of APOBEC3G-Vif complex
Descriptor: APOBEC3G, Core binding factor beta, RNA (5'-R(*CP*GP*GP*UP*UP*GP*AP*UP*UP*GP*UP*UP*UP*UP*AP*AP*CP*AP*A)-3'), ...
Authors:Kouno, T, Shibata, S, Hyun, J, Kim, T.G, Wolf, M.
Deposit date:2023-04-24
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural insights into RNA bridging between HIV-1 Vif and antiviral factor APOBEC3G.
Nat Commun, 14, 2023
2RNG
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BU of 2rng by Molmil
Solution structure of big defensin
Descriptor: Big defensin
Authors:Kouno, T, Fujitani, N, Osaki, T, Kawabata, S, Nishimura, S, Mizuguchi, M, Aizawa, T, Demura, M, Nitta, K, Kawano, K.
Deposit date:2007-12-27
Release date:2008-10-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A novel beta-defensin structure: a potential strategy of big defensin for overcoming resistance by Gram-positive bacteria
Biochemistry, 47, 2008
1V49
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BU of 1v49 by Molmil
Solution structure of microtubule-associated protein light chain-3
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B
Authors:Kouno, T, Mizuguchi, M, Tanida, I, Ueno, T, Kominami, E, Kawano, K.
Deposit date:2003-11-11
Release date:2004-12-28
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of microtubule-associated protein light chain 3 and identification of its functional subdomains.
J.Biol.Chem., 280, 2005
2JX8
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BU of 2jx8 by Molmil
Solution structure of hPCIF1 WW domain
Descriptor: Phosphorylated CTD-interacting factor 1
Authors:Kouno, T, Iwamoto, Y, Hirose, Y, Aizawa, T, Demura, M, Kawano, K, Ohkuma, Y, Mizuguchi, M.
Deposit date:2007-11-09
Release date:2008-11-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:1H, 13C, and 15N resonance assignments of hPCIF1 WW domain
To be Published
2RQ2
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BU of 2rq2 by Molmil
The solution structure of the N-terminal fragment of big defensin
Descriptor: Big defensin
Authors:Kouno, T, Mizuguchi, M, Aizawa, T, Shinoda, H, Demura, M, Kawabata, S, Kawano, K.
Deposit date:2009-01-07
Release date:2009-08-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A novel beta-defensin structure: big defensin changes its N-terminal structure to associate with the target membrane
Biochemistry, 48, 2009
2MZZ
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BU of 2mzz by Molmil
NMR structure of APOBEC3G NTD variant, sNTD
Descriptor: Apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like 3G variant, ZINC ION
Authors:Kouno, T, Luengas, E.M, Shigematu, M, Shandilya, S.M.D, Zhang, J, Chen, L, Hara, M, Schiffer, C.A, Harris, R.S, Matsuo, H.
Deposit date:2015-02-28
Release date:2015-05-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G.
Nat.Struct.Mol.Biol., 22, 2015
1V50
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BU of 1v50 by Molmil
Solution structure of phosphorylated N-terminal fragment of S100C/A11 protein
Descriptor: Calgizzarin
Authors:Kouno, T, Mizuguchi, M, Sakaguchi, M, Makino, E, Huh, N, Kawano, K.
Deposit date:2003-11-20
Release date:2005-03-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Study on structure-activity relationship between the N-terminal region of S100C protein and its function
Peptide Science, 40, 2003
1V4Z
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BU of 1v4z by Molmil
Solution structure of the N-terminal fragment of S100C/A11 protein
Descriptor: Calgizzarin
Authors:Kouno, T, Mizuguchi, M, Sakaguchi, M, Makino, E, Huh, N, Kawano, K.
Deposit date:2003-11-20
Release date:2005-03-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Study on structure-activity relationship between the N-terminal region of S100C protein and its function
Peptide Science, 40, 2003
2E45
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BU of 2e45 by Molmil
Solution structure of Fe65 WW domain
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1
Authors:Kouno, T, Mizuguchi, M, Nozawa, Y, Sugaya, T, Kawano, K.
Deposit date:2006-12-04
Release date:2006-12-26
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of Fe65 WW domain
to be published
2E2F
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BU of 2e2f by Molmil
Solution structure of DSP
Descriptor: Diapausin
Authors:Kouno, T, Mizuguchi, M, Suzuki, K, Kawano, K.
Deposit date:2006-11-12
Release date:2007-11-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The structure of a novel insect peptide explains its Ca2+ channel blocking and antifungal activities
Biochemistry, 46, 2007
2E8J
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BU of 2e8j by Molmil
Solution structure of dynein light chain 2A
Descriptor: Dynein light chain 2A, cytoplasmic
Authors:Kouno, T, Nabeshima, Y, Mizuguchi, M, Kawano, K.
Deposit date:2007-01-21
Release date:2008-01-22
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of dynein light chain 2A
To be Published
3A5P
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BU of 3a5p by Molmil
Crystal structure of hemagglutinin
Descriptor: Haemagglutinin I
Authors:Watanabe, N, Sakai, N, Nakamura, T, Nabeshima, Y, Kouno, T, Mizuguchi, M, Kawano, K.
Deposit date:2009-08-10
Release date:2010-08-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The Structure of Physarum polycephalum hemagglutinin I suggests a minimal carbohydrate recognition domain of legume lectin fold
J.Mol.Biol., 405, 2011
2KOZ
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BU of 2koz by Molmil
Solution structure of nasonin-1
Descriptor: nasonin-1
Authors:Kouno, T, Tian, C, Luo, L, Zhu, S, Mizuguchi, M.
Deposit date:2009-10-04
Release date:2010-10-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of nasonin-1
To be Published
2KP0
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BU of 2kp0 by Molmil
Solution structure of nasonin-1M
Descriptor: nasonin-1M
Authors:Kouno, T, Tian, C, Luo, L, Zhu, S, Mizuguchi, M.
Deposit date:2009-10-04
Release date:2010-10-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of nasonin-1M
To be Published
4ZY3
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BU of 4zy3 by Molmil
Crystal Structure of Keap1 in Complex with a small chemical compound, K67
Descriptor: FORMIC ACID, Kelch-like ECH-associated protein 1, N,N'-[2-(2-oxopropyl)naphthalene-1,4-diyl]bis(4-ethoxybenzenesulfonamide)
Authors:Fukutomi, T, Iso, T, Suzuki, T, Takagi, K, Mizushima, T, Komatsu, M, Yamamoto, M.
Deposit date:2015-05-21
Release date:2016-05-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
Nat Commun, 7, 2016
3WDZ
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BU of 3wdz by Molmil
Crystal Structure of Keap1 in Complex with phosphorylated p62
Descriptor: Kelch-like ECH-associated protein 1, Peptide from Sequestosome-1
Authors:Fukutomi, T, Takagi, K, Mizushima, T, Tanaka, K, Komatsu, M, Yamamoto, M.
Deposit date:2013-06-26
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy.
Mol.Cell, 51, 2013
4IOU
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BU of 4iou by Molmil
Crystal structure of the HIV-1 Vif binding, catalytically active domain of APOBEC3F
Descriptor: DNA dC->dU-editing enzyme APOBEC-3F, ZINC ION
Authors:Bohn, M, Shandilya, S.M.D, Schiffer, C.A.
Deposit date:2013-01-08
Release date:2013-05-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.751 Å)
Cite:Crystal Structure of the DNA Cytosine Deaminase APOBEC3F: The Catalytically Active and HIV-1 Vif-Binding Domain.
Structure, 21, 2013
4XXO
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BU of 4xxo by Molmil
Crystal Structure of Human APOBEC3A
Descriptor: CHLORIDE ION, DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Bohn, M.F, Shandilya, S.M.D, Schiffer, C.A.
Deposit date:2015-01-30
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.843 Å)
Cite:The ssDNA Mutator APOBEC3A Is Regulated by Cooperative Dimerization.
Structure, 23, 2015
2DCV
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BU of 2dcv by Molmil
The solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
Descriptor: Tachystatin-B1
Authors:Fujitani, N, Kohno, T.
Deposit date:2006-01-16
Release date:2007-01-23
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The solution structure of horseshoe crab antimicrobial peptide tachystatin B with an inhibitory cystine-knot motif
J.Pept.Sci., 13, 2007
2DCW
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BU of 2dcw by Molmil
The solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
Descriptor: Tachystatin-B2
Authors:Fujitani, N, Kawano, K.
Deposit date:2006-01-16
Release date:2007-01-23
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The solution structure of horseshoe crab antimicrobial peptide tachystatin B with an inhibitory cystine-knot motif
J.Pept.Sci., 13, 2007

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