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7N4Y
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BU of 7n4y by Molmil
The structure of bovine thyroglobulin with iodinated tyrosines
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kim, K, Clarke, O.B.
Deposit date:2021-06-04
Release date:2021-11-10
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:The structure of natively iodinated bovine thyroglobulin.
Acta Crystallogr D Struct Biol, 77, 2021
4TX1
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BU of 4tx1 by Molmil
The crystal structure of carbohydrate acetylesterase family member from Sinorhizobium meliloti
Descriptor: Esterase
Authors:Kim, K, Kim, S.S, Pandian, R, Ngo, T.D.
Deposit date:2014-07-02
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical characterization of a carbohydrate acetylesterase from Sinorhizobium meliloti 1021.
Febs Lett., 589, 2015
2L4M
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BU of 2l4m by Molmil
Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA
Descriptor: Uncharacterized protein
Authors:Kim, K, Khayrutdinov, B.I, Jeon, Y.H, Kim, K.K.
Deposit date:2010-10-08
Release date:2011-04-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA
Proc.Natl.Acad.Sci.USA, 2011
2FI7
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BU of 2fi7 by Molmil
Crystal Structure of PilF : Functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa
Descriptor: type 4 fimbrial biogenesis protein PilF
Authors:Kim, K.
Deposit date:2005-12-28
Release date:2006-06-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of PilF: functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 340, 2006
2HK1
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BU of 2hk1 by Molmil
Crystal structure of D-psicose 3-epimerase (DPEase) in the presence of D-fructose
Descriptor: D-PSICOSE 3-EPIMERASE, D-fructose, MANGANESE (II) ION
Authors:Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
Deposit date:2006-07-03
Release date:2006-08-29
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
2HK0
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BU of 2hk0 by Molmil
Crystal structure of D-psicose 3-epimerase (DPEase) in the absence of substrate
Descriptor: D-PSICOSE 3-EPIMERASE
Authors:Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
Deposit date:2006-07-03
Release date:2006-08-29
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
3E74
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BU of 3e74 by Molmil
Crystal structure of E. coli allantoinase with iron ions at the metal center
Descriptor: Allantoinase, FE (III) ION
Authors:Kim, K.
Deposit date:2008-08-17
Release date:2009-02-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of metal-dependent allantoinase from Escherichia coli
J.Mol.Biol., 387, 2009
7CMX
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BU of 7cmx by Molmil
Isocitrate lyase from Bacillus cereus ATCC 14579
Descriptor: Isocitrate lyase
Authors:Kim, K, Ki, D, Lee, S.H.
Deposit date:2020-07-29
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Isocitrate lyase from Bacillus cereus ATCC 14579
To Be Published
7CMY
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BU of 7cmy by Molmil
Isocitrate lyase from Bacillus cereus ATCC 14579 in complex with Magnessium ion, glyoxylate, and succinate
Descriptor: GLYOXYLIC ACID, Isocitrate lyase, MAGNESIUM ION, ...
Authors:Kim, K, Ki, D, Lee, S.H.
Deposit date:2020-07-29
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Isocitrate lyase from Bacillus cereus ATCC 14579 in complex with Magnessium ion, glyoxylate, and succinate
To Be Published
2Q37
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BU of 2q37 by Molmil
Crystal structure of OHCU decarboxylase in the presence of (S)-allantoin
Descriptor: 1-[(4S)-2,5-DIOXOIMIDAZOLIDIN-4-YL]UREA, OHCU decarboxylase
Authors:Kim, K.
Deposit date:2007-05-30
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional basis for (s)-allantoin formation in the ureide pathway.
J.Biol.Chem., 282, 2007
6WHA
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BU of 6wha by Molmil
HTR2A bound to 25-CN-NBOH in complex with a mini-Galpha-q protein, beta/gamma subunits and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)
Descriptor: 4-(2-{[(2-hydroxyphenyl)methyl]amino}ethyl)-2,5-dimethoxybenzonitrile, G subunit q (Gi2-mini-Gq chimeric), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Skiniotis, G, Roth, B, Kim, K, Panova, O.
Deposit date:2020-04-07
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure of a Hallucinogen-Activated Gq-Coupled 5-HT2A Serotonin Receptor
Cell(Cambridge,Mass.), 182, 2020
5W7Y
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BU of 5w7y by Molmil
Crystal Structure of FHA domain of human APLF in complex with XRCC1 monophosphorylated mutated peptide
Descriptor: Aprataxin and PNK-like factor, DNA repair protein XRCC1
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5W7W
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BU of 5w7w by Molmil
Crystal Structure of FHA domain of human APLF
Descriptor: Aprataxin and PNK-like factor, FORMIC ACID, SODIUM ION
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.348 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5W7X
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BU of 5w7x by Molmil
Crystal Structure of FHA domain of human APLF in complex with XRCC1 bisphospho peptide
Descriptor: Aprataxin and PNK-like factor, DNA repair protein XRCC1
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
7YIT
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BU of 7yit by Molmil
Molecular mechanism of biased signaling at the kappa opioid receptor
Descriptor: Kappa-type opioid receptor, Nanobody39, Soluble cytochrome b562, ...
Authors:Kim, K, Che, T.
Deposit date:2022-07-18
Release date:2023-04-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Molecular mechanism of biased signaling at the kappa opioid receptor.
Nat Commun, 14, 2023
6XQ9
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BU of 6xq9 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with Fragments 1 & 13
Descriptor: 4-(3-hydroxyphenoxy)benzoic acid, 7-methyl-3-phenyl-1H-indole-2-carboxylic acid, ACETATE ION, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
6XQ6
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BU of 6xq6 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 11
Descriptor: 3-phenoxyphenol, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
6XQ1
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BU of 6xq1 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with 3-(3-((4-(4-carboxyphenoxy)benzyl)oxy)phenyl)-1H-indole-2-carboxylic acid
Descriptor: 3-[3-({[3-(4-carboxyphenoxy)phenyl]methoxy}methyl)phenyl]-1H-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
6XQ3
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BU of 6xq3 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with 3-(3-(((3-(4-Carboxyphenoxy)benzyl)oxy)methyl)phenyl)-1H-indole-2-carboxylic acid
Descriptor: 3-(3-{[3-(4-carboxyphenoxy)phenyl]methoxy}phenyl)-1H-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
6XQ8
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BU of 6xq8 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with Fragments 1 & 11
Descriptor: 3-phenoxyphenol, 7-methyl-3-phenyl-1H-indole-2-carboxylic acid, ACETATE ION, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
6XQ5
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BU of 6xq5 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 1
Descriptor: 7-methyl-3-phenyl-1H-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
6XQ7
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BU of 6xq7 by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 5
Descriptor: 5-bromo-3-methyl-1H-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
8ELJ
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BU of 8elj by Molmil
SARS-CoV-2 spike glycoprotein in complex with the ICO-hu23 neutralizing antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ICO-hu23 antibody Fab heavy chain, ...
Authors:Yee, A.W, Morizumi, T, Kim, K, Kuo, A, Ernst, O.P.
Deposit date:2022-09-24
Release date:2023-07-19
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Broadly neutralizing humanized SARS-CoV-2 antibody binds to a conserved epitope on Spike and provides antiviral protection through inhalation-based delivery in non-human primates.
Plos Pathog., 19, 2023
7LML
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BU of 7lml by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with 3-(3-(((3-(4-Carboxyphenoxy)benzyl)oxy)methyl)phenyl)-1H-indole-2-carboxylic acid
Descriptor: 6-iodanyl-1~{H}-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2021-02-05
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
3FFL
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BU of 3ffl by Molmil
Crystal Structure of the N-terminal Domain of Anaphase-Promoting Complex Subunit 7
Descriptor: Anaphase-promoting complex subunit 7
Authors:Han, D, Kim, K, Kim, Y, Kim, Y.
Deposit date:2008-12-03
Release date:2008-12-16
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the N-terminal Domain of Anaphase-Promoting Complex Subunit 7
To be published

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