7UNI
| De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester, SP2-ZnPPaM | Descriptor: | 1,2-ETHANEDIOL, PHOSPHATE ION, SP2-ZnPPaM designed chlorophyll dimer protein, ... | Authors: | Kennedy, M.A, Stoddard, B.L, Ennist, N.M. | Deposit date: | 2022-04-11 | Release date: | 2023-04-19 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester, SP2-ZnPPaM To Be Published
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7UNJ
| De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester matching geometry of purple bacterial special pair, SP1-ZnPPaM | Descriptor: | 1,2-ETHANEDIOL, SP1-ZnPPaM designed chlorophyll dimer protein, SULFATE ION, ... | Authors: | Kennedy, M.A, Stoddard, B.L, Ennist, N.M. | Deposit date: | 2022-04-11 | Release date: | 2023-04-19 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester matching geometry of purple bacterial special pair, SP1-ZnPPaM To Be Published
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7UNH
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8E0L
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8EPX
| Type IIS Restriction Endonuclease PaqCI, DNA bound | Descriptor: | CALCIUM ION, DNA 1a, DNA 1b, ... | Authors: | Kennedy, M.A, Stoddard, B.L. | Deposit date: | 2022-10-06 | Release date: | 2023-03-22 | Last modified: | 2023-06-07 | Method: | ELECTRON MICROSCOPY (3.15 Å) | Cite: | Structures, activity and mechanism of the Type IIS restriction endonuclease PaqCI. Nucleic Acids Res., 51, 2023
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8EM1
| Type IIS Restriction Endonuclease PaqCI, DNA Unbound | Descriptor: | 1,2-ETHANEDIOL, PaqCI, DNA Unbound | Authors: | Kennedy, M.A, Stoddard, B.L. | Deposit date: | 2022-09-26 | Release date: | 2023-03-22 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structures, activity and mechanism of the Type IIS restriction endonuclease PaqCI. Nucleic Acids Res., 51, 2023
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2F3L
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2G0Y
| Crystal Structure of a Lumenal Pentapeptide Repeat Protein from Cyanothece sp 51142 at 2.3 Angstrom Resolution. Tetragonal Crystal Form | Descriptor: | CALCIUM ION, pentapeptide repeat protein | Authors: | Kennedy, M.A, Ni, S, Buchko, G.W, Robinson, H. | Deposit date: | 2006-02-13 | Release date: | 2006-11-07 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Characterization of two potentially universal turn motifs that shape the repeated five-residues fold - Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142 Protein Sci., 15, 2006
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6UV7
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6UVI
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6OMX
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2O5F
| Crystal Structure of DR0079 from Deinococcus radiodurans at 1.9 Angstrom Resolution | Descriptor: | Putative Nudix hydrolase DR_0079 | Authors: | Kennedy, M.A, Buchko, G.W, Ni, S, Robinson, H. | Deposit date: | 2006-12-05 | Release date: | 2007-12-18 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates. Biochemistry, 47, 2008
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2O6W
| Crystal Structure of a Pentapeptide Repeat Protein (Rfr23) from the cyanobacterium Cyanothece 51142 | Descriptor: | ARSENIC, Repeat Five Residue (Rfr) protein or pentapeptide repeat protein | Authors: | Kennedy, M.A, Buchko, G.W, Ni, S, Robinson, H, Pakrasi, H.B. | Deposit date: | 2006-12-08 | Release date: | 2007-12-18 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Insights into the structural variation between pentapeptide repeat proteins-Crystal structure of Rfr23 from Cyanothece 51142. J.Struct.Biol., 162, 2008
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3DU1
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3E56
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7RKC
| Computationally designed tunable C2 symmetric tandem repeat homodimer, D_3_633 | Descriptor: | ACETATE ION, D_3_633 | Authors: | Kennedy, M.A, Stoddard, B.L, Hicks, D.R, Bera, A.K. | Deposit date: | 2021-07-22 | Release date: | 2022-05-18 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | De novo design of protein homodimers containing tunable symmetric protein pockets. Proc.Natl.Acad.Sci.USA, 119, 2022
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2KBN
| Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a. | Descriptor: | Conserved protein | Authors: | Ramelot, T.A, Ding, K, Magliqui, M, Jiang, M, Ciccosanti, C, Xiao, R, Lui, J, Everett, J.K, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2008-12-03 | Release date: | 2009-07-07 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | NMR structure of the OB domain of mm0293 from the archea methanosarcina mazei To be Published
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2KCM
| Solution NMR structure of the N-terminal OB-domain of SO_1732 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR210A. | Descriptor: | Cold shock domain family protein | Authors: | Ramelot, T.A, Maglaqui, M, Jiang, M, Ciccosanti, C, Xiao, R, Lui, J, Everett, J.K, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2008-12-23 | Release date: | 2009-02-10 | Last modified: | 2011-07-13 | Method: | SOLUTION NMR | Cite: | Solution NMR structure of the N-terminal OB-domain of SO_1732 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR210A. To be Published
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2KEN
| Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a. | Descriptor: | Conserved protein | Authors: | Ramelot, T.A, Ding, K, Magliqui, M, Jiang, M, Ciccosanti, C, Xiao, R, Lui, J, Everett, J.K, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2009-01-30 | Release date: | 2009-02-10 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | NMR structure of the OB domain of MM0293 from the archea Methanosarcina mazei To be Published
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1D1R
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1COC
| SOLUTION-STATE STRUCTURE OF A DNA DODECAMER DUPLEX CONTAINING A CIS-SYN THYMINE CYCLOBUTANE DIMER. | Descriptor: | DNA (5'-D(*CP*TP*TP*AP*AP*TP*TP*CP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*GP*AP*AP*TP*TP*AP*AP*G)-3') | Authors: | McAteer, K, Jing, Y, Kao, J, Taylor, J.-S, Kennedy, M.A. | Deposit date: | 1999-05-26 | Release date: | 1999-06-09 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA. J.Mol.Biol., 282, 1998
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1D4U
| INTERACTIONS OF HUMAN NUCLEOTIDE EXCISION REPAIR PROTEIN XPA WITH RPA70 AND DNA: CHEMICAL SHIFT MAPPING AND 15N NMR RELAXATION STUDIES | Descriptor: | NUCLEOTIDE EXCISION REPAIR PROTEIN XPA (XPA-MBD), ZINC ION | Authors: | Buchko, G.W, Daughdrill, G.W, de Lorimier, R, Rao, S, Isern, N.G, Lingbeck, J, Taylor, J, Wold, M.S, Gochin, M, Spicer, L.D, Lowry, D.F, Kennedy, M.A. | Deposit date: | 1999-10-06 | Release date: | 1999-10-17 | Last modified: | 2022-02-16 | Method: | SOLUTION NMR | Cite: | Interactions of human nucleotide excision repair protein XPA with DNA and RPA70 Delta C327: chemical shift mapping and 15N NMR relaxation studies. Biochemistry, 38, 1999
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3N90
| The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen. | Descriptor: | SULFATE ION, Thylakoid lumenal 15 kDa protein 1, chloroplastic | Authors: | Ni, S, Mckgookey, M, Tinch, S.L, Jones, A.N, Jayaraman, S, Kennedy, M.A. | Deposit date: | 2010-05-28 | Release date: | 2011-06-29 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen. To be Published
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1EIW
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1EO1
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