Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6U1O
DownloadVisualize
BU of 6u1o by Molmil
Structure of two-domain translational regulator Yih1 reveals a possible mechanism of action
Descriptor: Protein IMPACT homolog
Authors:Harjes, E, Jameson, G.B, Edwards, P.J.B, Goroncy, A.K, Loo, T, Norris, G.E.
Deposit date:2019-08-16
Release date:2021-02-10
Last modified:2021-02-17
Method:SOLUTION NMR
Cite:Experimentally based structural model of Yih1 provides insight into its function in controlling the key translational regulator Gcn2.
Febs Lett., 595, 2021
6U1L
DownloadVisualize
BU of 6u1l by Molmil
Structure of two-domain translational regulator Yih1 reveals a possible mechanism of action
Descriptor: Protein IMPACT homolog
Authors:Harjes, E, Jameson, G.B, Edwards, P.J.B, Goroncy, A.K, Loo, T, Norris, G.E.
Deposit date:2019-08-16
Release date:2021-02-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Experimentally based structural model of Yih1 provides insight into its function in controlling the key translational regulator Gcn2.
Febs Lett., 595, 2021
2FNF
DownloadVisualize
BU of 2fnf by Molmil
C1 domain of Nore1
Descriptor: ZINC ION, putative Ras Effector Nore1
Authors:Harjes, E, Harjes, S, Wohlgemuth, S, Krieger, E, Herrmann, C, Muller, K.H, Bayer, P.
Deposit date:2006-01-11
Release date:2006-02-07
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:GTP-Ras disrupts the intramolecular complex of C1 and RA domains of Nore1.
Structure, 14, 2006
6BQI
DownloadVisualize
BU of 6bqi by Molmil
Structure of two-domain translational regulator Yih1 reveals a possible mechanism of action
Descriptor: Protein IMPACT homolog
Authors:Harjes, E, Jameson, G.B, Edwards, P.J.B, Goroncy, A.K, Loo, T, Norris, G.E.
Deposit date:2017-11-27
Release date:2018-11-28
Last modified:2023-06-14
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Experimentally based structural model of Yih1 provides insight into its function in controlling the key translational regulator Gcn2.
Febs Lett., 2020
8DFZ
DownloadVisualize
BU of 8dfz by Molmil
NMR shows why a small chemical change almost abolishes the antimicrobial activity of GccF
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bacteriocin glycocin F
Authors:Harjes, E, Edwards, P.J.B, Norris, G.
Deposit date:2022-06-23
Release date:2023-07-05
Last modified:2023-09-13
Method:SOLUTION NMR
Cite:NMR Shows Why a Small Chemical Change Almost Abolishes the Antimicrobial Activity of Glycocin F.
Biochemistry, 62, 2023
2KEM
DownloadVisualize
BU of 2kem by Molmil
Extended structure of citidine deaminase domain of APOBEC3G
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Harjes, E, Gross, P.J, Chen, K, Lu, Y, Shindo, K, Nowarski, R, Gross, J.D, Kotler, M, Harris, R.S, Matsuo, H.
Deposit date:2009-01-30
Release date:2009-06-02
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:An extended structure of the APOBEC3G catalytic domain suggests a unique holoenzyme model
J.Mol.Biol., 389, 2009
8FII
DownloadVisualize
BU of 8fii by Molmil
Wild type APOBEC3A in complex with TT(FdZ)-hairpin inhibitor (crystal form 1)
Descriptor: DNA (5'-D(P*GP*CP*GP*CP*TP*TP*(UFP)P*GP*CP*GP*C)-3'), DNA dC->dU-editing enzyme APOBEC-3A, PHOSPHATE ION, ...
Authors:Harjes, S, Jameson, G.B, Harjes, E, Filichev, V.V, Kurup, H.M.
Deposit date:2022-12-16
Release date:2023-09-06
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:DNA-based inhibitors restrict mutagenic activity of APOBEC3 in cells
To Be Published
8FIK
DownloadVisualize
BU of 8fik by Molmil
APOBEC3A E72A inactive mutant in complex with ATTC-hairpin DNA substrate
Descriptor: CHLORIDE ION, DNA (5'-D(P*CP*CP*CP*AP*TP*CP*AP*TP*TP*CP*GP*AP*TP*GP*GP*G)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ...
Authors:Harjes, S, Jameson, G.B, Harjes, E, Filichev, V.V, Kurup, H.M.
Deposit date:2022-12-16
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:DNA-based inhibitors restrict mutagenic activity of APOBEC3 in cells
To Be Published
8FIJ
DownloadVisualize
BU of 8fij by Molmil
Wild type APOBEC3A in complex with TT(FdZ)-hairpin inhibitor (crystal form 2)
Descriptor: DNA (5'-D(*GP*CP*GP*CP*TP*TP*(UFP)P*GP*CP*GP*CP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, PHOSPHATE ION, ...
Authors:Harjes, S, Jameson, G.B, Harjes, E, Filichev, V.V, Kurup, H.M.
Deposit date:2022-12-16
Release date:2023-09-06
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:DNA-based inhibitors restrict mutagenic activity of APOBEC3 in cells
To Be Published
8FIL
DownloadVisualize
BU of 8fil by Molmil
Zinc-free APOBEC3A (inactive E72A mutant) in complex with TTC-hairpin DNA substrate
Descriptor: CHLORIDE ION, DNA (5'-D(*TP*GP*CP*GP*CP*TP*TP*CP*GP*CP*GP*CP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ...
Authors:Harjes, S, Jameson, G.B, Harjes, E, Filichev, V.V, Kurup, H.M.
Deposit date:2022-12-16
Release date:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:DNA-based inhibitors restrict mutagenic activity of APOBEC3 in cells
To Be Published
8FIM
DownloadVisualize
BU of 8fim by Molmil
Structure of APOBEC3A (E72A inactive mutant) in complex with TTC-hairpin DNA substrate
Descriptor: CHLORIDE ION, DNA (5'-D(*TP*GP*CP*GP*CP*TP*TP*CP*GP*CP*GP*CP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ...
Authors:Harjes, S, Jameson, G.B, Harjes, E, Filichev, V.V, Kurup, H.M.
Deposit date:2022-12-16
Release date:2023-09-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:DNA-based inhibitors restrict mutagenic activity of APOBEC3 in cells
To Be Published
6B34
DownloadVisualize
BU of 6b34 by Molmil
NMR ensemble of Tyrocidine A analogue AC3.27
Descriptor: Tyrocidine A analogue D-PHE-BE2-PHE-D-PHE-ASN-GLN-TYR-VAL-ORN-LEU
Authors:Cameron, A.J, Ewdards, P.J.B, Harjes, E, Sarojini, V.
Deposit date:2017-09-20
Release date:2017-12-06
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Tyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity.
J. Med. Chem., 60, 2017
6B35
DownloadVisualize
BU of 6b35 by Molmil
NMR ensemble of Tyrocidine A analogue AC3.28
Descriptor: Tyrocidine A analogue D-PHE-BE2-PHE-D-PHE-ASN-LYS-TYR-VAL-ORN-LEU
Authors:Cameron, A.J, Ewdards, P.J.B, Harjes, E, Sarojini, V.
Deposit date:2017-09-20
Release date:2017-12-06
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Tyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity.
J. Med. Chem., 60, 2017
2JYW
DownloadVisualize
BU of 2jyw by Molmil
Solution structure of C-terminal domain of APOBEC3G
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Chen, K, Harjes, E, Gross, P.J, Fahmy, A, Lu, Y, Shindo, K, Harris, R.S, Matsuo, H.
Deposit date:2007-12-20
Release date:2008-02-26
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Structure of the DNA deaminase domain of the HIV-1 restriction factor APOBEC3G.
Nature, 452, 2008
2LQZ
DownloadVisualize
BU of 2lqz by Molmil
Structure of the RNA claw of the DNA packaging motor of bacteriophage 29
Descriptor: RNA (27-MER)
Authors:Harjes, E.J, Matsuo, H.J, Kitamura, A.J.
Deposit date:2012-03-19
Release date:2012-08-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the RNA claw of the DNA packaging motor of bacteriophage 29.
Nucleic Acids Res., 40, 2012
3IR2
DownloadVisualize
BU of 3ir2 by Molmil
Crystal structure of the APOBEC3G catalytic domain
Descriptor: CHLORIDE ION, DNA dC->dU-editing enzyme APOBEC-3G, MAGNESIUM ION, ...
Authors:Shandilya, S.M.D, Schiffer, C.A.
Deposit date:2009-08-21
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of the APOBEC3G Catalytic Domain Reveals Potential Oligomerization Interfaces.
Structure, 18, 2010
6ANN
DownloadVisualize
BU of 6ann by Molmil
Structure of cyclic D-Leu-N-methyl-D-Phe-2-Abz-D-Ala at 0.76 Angstrom
Descriptor: ETHANOL, cyclic DLE-ZAE-BE2-DAL
Authors:Cameron, A.J, Sarojini, V, Squire, C.J.
Deposit date:2017-08-14
Release date:2017-11-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.76 Å)
Cite:Crystal and NMR Structures of a Peptidomimetic beta-Turn That Provides Facile Synthesis of 13-Membered Cyclic Tetrapeptides.
Chem Asian J, 12, 2017
6ANM
DownloadVisualize
BU of 6anm by Molmil
Structure of D-Leu-D-Phe-2-Abz-D-Ala at 0.64 Angstrom
Descriptor: DLE-DPN-BE2-DAL
Authors:Cameron, A.J, Sarojini, V, Squire, C.J.
Deposit date:2017-08-14
Release date:2017-11-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.64 Å)
Cite:Crystal and NMR Structures of a Peptidomimetic beta-Turn That Provides Facile Synthesis of 13-Membered Cyclic Tetrapeptides.
Chem Asian J, 12, 2017

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon