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4TU3
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BU of 4tu3 by Molmil
Crystal structure of yeast Sac1/Vps74 complex
Descriptor: Phosphoinositide phosphatase SAC1, Vacuolar protein sorting-associated protein 74
Authors:Cai, Y, Horenkamp, F.A, Reinisch, K.R.
Deposit date:2014-06-23
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.187 Å)
Cite:Sac1-Vps74 structure reveals a mechanism to terminate phosphoinositide signaling in the Golgi apparatus.
J.Cell Biol., 206, 2014
4ZKI
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BU of 4zki by Molmil
The crystal structure of Histidine Kinase YycG with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Histidine kinase
Authors:Cai, Y.
Deposit date:2015-04-30
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Conformational dynamics of the essential sensor histidine kinase WalK
Acta Crystallogr D Struct Biol, 73, 2017
4U7O
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BU of 4u7o by Molmil
Active histidine kinase bound with ATP
Descriptor: AMP PHOSPHORAMIDATE, Histidine protein kinase sensor protein
Authors:Cai, Y, Hu, X, Sang, J.
Deposit date:2014-07-31
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.395 Å)
Cite:Conformational dynamics of the essential sensor histidine kinase WalK.
Acta Crystallogr D Struct Biol, 73, 2017
4U7N
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BU of 4u7n by Molmil
Inactive structure of histidine kinase
Descriptor: Histidine protein kinase sensor protein
Authors:Cai, Y, Hu, X, Sang, J.
Deposit date:2014-07-31
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformational dynamics of the essential sensor histidine kinase WalK.
Acta Crystallogr D Struct Biol, 73, 2017
6IX8
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BU of 6ix8 by Molmil
The structure of LepI C52A in complex with SAM and its substrate analogue
Descriptor: (1R,2R,4aS,8S,8aR)-2,8-dimethyl-5'-phenyl-4a,5,6,7,8,8a-hexahydro-2H,2'H-spiro[naphthalene-1,3'-pyridine]-2',4'(1'H)-dione, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
Deposit date:2018-12-09
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
6IX5
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BU of 6ix5 by Molmil
The structure of LepI complex with SAM and its substrate analogue
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-3-[(2S,6E,8E)-2-methyldeca-6,8-dienoyl]-5-phenylpyridin-2(1H)-one, CHLORIDE ION, ...
Authors:Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
Deposit date:2018-12-09
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
6IX3
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BU of 6ix3 by Molmil
The structure of LepI complex with SAM
Descriptor: CHLORIDE ION, O-methyltransferase lepI, S-ADENOSYLMETHIONINE
Authors:Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
Deposit date:2018-12-09
Release date:2019-07-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
6IX9
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BU of 6ix9 by Molmil
The structure of LepI C52A in complex with SAM and leporin C
Descriptor: (6R,6aS,10S,10aR)-10-methyl-4-phenyl-6-[(1E)-prop-1-en-1-yl]-2,6,6a,7,8,9,10,10a-octahydro-1H-[2]benzopyrano[4,3-c]pyridin-1-one, CHLORIDE ION, GLYCEROL, ...
Authors:Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
Deposit date:2018-12-09
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.776 Å)
Cite:Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
6IX7
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BU of 6ix7 by Molmil
The structure of LepI C52A in complex with SAH and substrate analogue
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-3-[(2S,6E,8E)-2-methyldeca-6,8-dienoyl]-5-phenylpyridin-2(1H)-one, CHLORIDE ION, ...
Authors:Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
Deposit date:2018-12-09
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.835 Å)
Cite:Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
3CUE
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BU of 3cue by Molmil
Crystal structure of a TRAPP subassembly activating the Rab Ypt1p
Descriptor: GTP-binding protein YPT1, PALMITIC ACID, Transport protein particle 18 kDa subunit, ...
Authors:Cai, Y, Reinisch, K.M.
Deposit date:2008-04-16
Release date:2008-07-08
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes.
Cell(Cambridge,Mass.), 133, 2008
1Q6X
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BU of 1q6x by Molmil
Crystal structure of rat choline acetyltransferase
Descriptor: SODIUM ION, choline O-acetyltransferase
Authors:Cai, Y, Rodgers, D.W.
Deposit date:2003-08-14
Release date:2004-06-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Choline acetyltransferase structure reveals distribution of mutations that cause motor disorders.
Embo J., 23, 2004
5C93
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BU of 5c93 by Molmil
Histidine kinase with ATP
Descriptor: Histidine kinase, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, SULFATE ION
Authors:Cai, Y.
Deposit date:2015-06-26
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.518 Å)
Cite:Conformational dynamics of the essential sensor histidine kinase WalK.
Acta Crystallogr D Struct Biol, 73, 2017
5CVV
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BU of 5cvv by Molmil
coniferyl alcohol bound monolignol 4-O-methyltransferase 9
Descriptor: (Iso)eugenol O-methyltransferase, 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Cai, Y, Liu, C.-J.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structure of coniferyl alcohol bound monolignol 4-O-methyltransferase 9 at 1.73 Angstroms resolution
To Be Published
5CVJ
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BU of 5cvj by Molmil
Monolignol 4-O-methyltransferase 5 - coniferyl alcohol
Descriptor: (Iso)eugenol O-methyltransferase, 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol, NITRATE ION, ...
Authors:Cai, Y, Liu, C.-J.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of coniferyl alcohol bound monolignol 4-O-methyltransferase at 1.68 Angstroms resolution
To Be Published
5CVU
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BU of 5cvu by Molmil
sinpyl alcohol bound monolignol 4-O-methyltransferase 5
Descriptor: (Iso)eugenol O-methyltransferase, 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2,6-dimethoxyphenol, NITRATE ION, ...
Authors:Cai, Y, Liu, C.-J.
Deposit date:2015-07-27
Release date:2015-09-16
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of sinapyl alcohol bound monolignol 4-O-methyltransferase at 1.60 Angstroms resolution
To Be Published
8GNI
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BU of 8gni by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-24
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GQ5
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BU of 8gq5 by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Descriptor: NAD(+) hydrolase SARM1, Nanobody C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-29
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GNJ
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BU of 8gnj by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody-C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-24
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
4I5S
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BU of 4i5s by Molmil
Structure and function of sensor histidine kinase
Descriptor: Putative histidine kinase CovS; VicK-like protein
Authors:Cai, Y.
Deposit date:2012-11-28
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mechanistic insights revealed by the crystal structure of a histidine kinase with signal transducer and sensor domains
Plos Biol., 11, 2013
6N5V
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BU of 6n5v by Molmil
Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
Descriptor: 2-(1H-indol-4-yl)ethan-1-amine, Strictosidine synthase
Authors:Cai, Y, Shao, N, Xie, H, Futamura, Y, Panjikar, S, Liu, H, Zhu, H, Osada, H, Zou, H.
Deposit date:2018-11-22
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Crystal Structure of Strictosidine in complex with 1H-indole-4-ethanamine
to be published
7DJT
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BU of 7djt by Molmil
Human SARM1 inhibitory state bounded with inhibitor dHNN
Descriptor: NAD(+) hydrolase SARM1, O3-methyl O5-(2-methylpropyl) 2,6-dimethyl-4-[2-(oxidanylamino)phenyl]pyridine-3,5-dicarboxylate
Authors:Cai, Y, Zhang, H.
Deposit date:2020-11-21
Release date:2021-05-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Permeant fluorescent probes visualize the activation of SARM1 and uncover an anti-neurodegenerative drug candidate.
Elife, 10, 2021
7PP7
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BU of 7pp7 by Molmil
Thunberia alata 16:0-ACP desaturase
Descriptor: Acyl-[acyl-carrier-protein] 6-desaturase, FE (III) ION
Authors:Guy, J.E, Whittle, E, Cai, Y, Chai, J, Lindqvist, Y, Shanklin, J.
Deposit date:2021-09-13
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Regioselectivity mechanism of the Thunbergia alata Delta 6-16:0-acyl carrier protein desaturase.
Plant Physiol., 188, 2022
4FVD
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BU of 4fvd by Molmil
Crystal structure of EV71 2A proteinase C110A mutant in complex with substrate
Descriptor: 10-mer peptide from 2A proteinase, 2A proteinase, ZINC ION
Authors:Cai, Q, Muhammad, Y, Liu, W, Gao, Z, Peng, X, Cai, Y, Wu, C, Zheng, Q, Li, J, Lin, T.
Deposit date:2012-06-29
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Conformational Plasticity of 2A Proteinase from Enterovirus 71
J.Virol., 87, 2013
4FVB
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BU of 4fvb by Molmil
Crystal structure of EV71 2A proteinase C110A mutant
Descriptor: 2A proteinase, ZINC ION
Authors:Cai, Q, Muhammad, Y, Liu, W, Gao, Z, Peng, X, Cai, Y, Wu, C, Zheng, Q, Li, J, Lin, T.
Deposit date:2012-06-29
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational Plasticity of 2A Proteinase from Enterovirus 71
J.Virol., 87, 2013
6UJV
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BU of 6ujv by Molmil
Model of the HIV-1 gp41 membrane-proximal external region, transmembrane domain and cytoplasmic tail (LLP2)
Descriptor: Envelope glycoprotein GP41
Authors:Piai, A, Fu, Q, Cai, Y, Ghantous, F, Xiao, T, Shaik, M.M, Peng, H, Rits-Volloch, S, Liu, Z, Chen, W, Seaman, M.S, Chen, B, Chou, J.J.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis of transmembrane coupling of the HIV-1 envelope glycoprotein.
Nat Commun, 11, 2020

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