Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1N0N
DownloadVisualize
BU of 1n0n by Molmil
Catalytic and Structural Effects of Amino-Acid Substitution at His30 in Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, SULFATE ION, Superoxide dismutase [Mn]
Authors:Borgstahl, G.E.O, Parge, H.E, Hickey, M.J, Beyer Jr, W.F, Hallewell, R.A, Tainer, J.A.
Deposit date:2002-10-14
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Catalytic and Structural Effects of Amino-Acid Substitution at His30 in Human Manganese Superoxide Dismutase
to be published
2PHY
DownloadVisualize
BU of 2phy by Molmil
PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED)
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Borgstahl, G.E.O, Getzoff, E.D.
Deposit date:1995-04-12
Release date:1995-10-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore.
Biochemistry, 34, 1995
8DLA
DownloadVisualize
BU of 8dla by Molmil
ClpP2 from Chlamydia trachomatis bound by MAS1-12
Descriptor: 1-{4-[(4-chlorophenyl)methyl]piperazin-1-yl}-2-methyl-2-[5-(trifluoromethyl)pyridine-2-sulfonyl]propan-1-one, ATP-dependent Clp protease proteolytic subunit 2, GLYCEROL, ...
Authors:Azadmanesh, J, Struble, L.R, Seleem, M.A, Ouellette, S, Conda-Sheridan, M, Borgstahl, G.E.O.
Deposit date:2022-07-07
Release date:2023-08-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The structure of caseinolytic protease subunit ClpP2 reveals a functional model of the caseinolytic protease system from Chlamydia trachomatis.
J.Biol.Chem., 299, 2023
2I5D
DownloadVisualize
BU of 2i5d by Molmil
Crystal Structure of Human Inosine Triphosphate Pyrophosphatase
Descriptor: inosine triphosphate pyrophosphohydrolase
Authors:Porta, J.C, Kozmin, S.G, Pavlov, Y.I, Borgstahl, G.E.O.
Deposit date:2006-08-24
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structure of the orthorhombic form of human inosine triphosphate pyrophosphatase.
Acta Crystallogr.,Sect.F, 62, 2006
6X60
DownloadVisualize
BU of 6x60 by Molmil
ClpP2 from Chlamydia trachomatis with resolved handle loop
Descriptor: ATP-dependent Clp protease proteolytic subunit 2
Authors:Azadmanesh, J, Struble, L.R, Seleem, M.A, Ouellette, S, Conda-Sheridan, M, Borgstahl, G.E.O.
Deposit date:2020-05-27
Release date:2020-06-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:ClpP2 from Chlamydia trachomatis with resolved handle loop
To Be Published
3EEO
DownloadVisualize
BU of 3eeo by Molmil
M. HhaI co-crystallized with synthetic dsDNA containing a propane diol in place of the deoxycytidine residue targeted for methylation.
Descriptor: 5'-D(P*DCP*DCP*DAP*DTP*DGP*DCP*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(P*DGP*DTP*DCP*DAP*DGP*(PDI)P*DGP*DCP*DAP*DTP*DGP*DG)-3', Modification methylase HhaI, ...
Authors:Porta, J.C, Christman, J.K, Borgstahl, G.E.O.
Deposit date:2008-09-05
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:M. HhaI co-crystallized with synthetic dsDNA containing a propane diol in place of the deoxycytidine residue targeted for methylation.
To be Published
5T30
DownloadVisualize
BU of 5t30 by Molmil
Human MnSOD-azide complex
Descriptor: AZIDE ION, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Azadmanesh, J, Trickel, S.R, Kolar, C.H, Lovelace, J.J, Borgstahl, G.E.O.
Deposit date:2016-08-24
Release date:2017-05-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Substrate-analog binding and electrostatic surfaces of human manganese superoxide dismutase.
J. Struct. Biol., 199, 2017
5VF9
DownloadVisualize
BU of 5vf9 by Molmil
Native human manganese superoxide dismutase
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Azadmanesh, J, Trickel, S.R, Borgstahl, G.E.O.
Deposit date:2017-04-07
Release date:2017-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Substrate-analog binding and electrostatic surfaces of human manganese superoxide dismutase.
J. Struct. Biol., 199, 2017
7KKW
DownloadVisualize
BU of 7kkw by Molmil
Neutron structure of Reduced Human MnSOD
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial, ...
Authors:Azadmanesh, J, Lutz, W.E, Coates, L, Weiss, K.L, Borgstahl, G.E.O.
Deposit date:2020-10-28
Release date:2021-04-21
Last modified:2024-04-10
Method:NEUTRON DIFFRACTION (2.3 Å)
Cite:Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.
Nat Commun, 12, 2021
7KKU
DownloadVisualize
BU of 7kku by Molmil
X-ray Counterpart to Neutron Structure of Oxidized Human MnSOD
Descriptor: MANGANESE (III) ION, PHOSPHATE ION, Superoxide dismutase [Mn], ...
Authors:Azadmanesh, J, Lutz, W.E, Coates, L, Weiss, K.L, Borgstahl, G.E.O.
Deposit date:2020-10-28
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.
Nat Commun, 12, 2021
7KKS
DownloadVisualize
BU of 7kks by Molmil
Neutron structure of Oxidized Human MnSOD
Descriptor: MANGANESE (III) ION, Superoxide dismutase [Mn], mitochondrial
Authors:Azadmanesh, J, Lutz, W.E, Coates, L, Weiss, K.L, Borgstahl, G.E.O.
Deposit date:2020-10-28
Release date:2021-04-21
Last modified:2023-10-18
Method:NEUTRON DIFFRACTION (2.2 Å)
Cite:Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.
Nat Commun, 12, 2021
7KLB
DownloadVisualize
BU of 7klb by Molmil
X-ray Counterpart to Neutron Structure of Reduced Human MnSOD
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Azadmanesh, J, Lutz, W.E, Coates, L, Weiss, K.L, Borgstahl, G.E.O.
Deposit date:2020-10-29
Release date:2021-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.
Nat Commun, 12, 2021
1XLU
DownloadVisualize
BU of 1xlu by Molmil
X-Ray Structure Of Di-Isopropyl-Phosphoro-Fluoridate (Dfp) Inhibited Butyrylcholinesterase after Aging
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nachon, F, Asojo, O.A, Borgstahl, G.E.O, Masson, P, Lockridge, O.
Deposit date:2004-09-30
Release date:2005-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Role of Water in Aging of Human Butyrylcholinesterase Inhibited by Echothiophate: The Crystal Structure Suggests Two Alternative Mechanisms of Aging
Biochemistry, 44, 2005
1XLV
DownloadVisualize
BU of 1xlv by Molmil
Ethylphosphorylated Butyrylcholinesterase (Aged) Obtained By Reaction With Echothiophate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nachon, F, Asojo, O.A, Borgstahl, G.E.O, Masson, P, Lockridge, O.
Deposit date:2004-09-30
Release date:2005-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.247 Å)
Cite:Role of Water in Aging of Human Butyrylcholinesterase Inhibited by Echothiophate: The Crystal Structure Suggests Two Alternative Mechanisms of Aging
Biochemistry, 44, 2005
1XLW
DownloadVisualize
BU of 1xlw by Molmil
Diethylphosphorylated Butyrylcholinesterase (Nonaged) Obtained By Reaction With Echothiophate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nachon, F, Asojo, O.A, Borgstahl, G.E.O, Masson, P, Lockridge, O.
Deposit date:2004-09-30
Release date:2005-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Role of Water in Aging of Human Butyrylcholinesterase Inhibited by Echothiophate: The Crystal Structure Suggests Two Alternative Mechanisms of Aging
Biochemistry, 44, 2005
1N0J
DownloadVisualize
BU of 1n0j by Molmil
The Structure of Human Mitochondrial MN3+ Superoxide Dismutase Reveals a Novel Tetrameric Interface of Two 4-Helix Bundles
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Borgstahl, G.E.O, Parge, H.E, Tainer, J.A.
Deposit date:2002-10-14
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of Human Mitochondrial Mn3+ Superoxide Dismutase Reveals a Novel Tetrameric Interface of Two 4-Helix Bundles
Cell(Cambridge,Mass.), 71, 1992
1CBL
DownloadVisualize
BU of 1cbl by Molmil
THE 1.9 ANGSTROM STRUCTURE OF DEOXY-BETA4 HEMOGLOBIN: ANALYSIS OF THE PARTITIONING OF QUATERNARY-ASSOCIATED AND LIGAND-INDUCED CHANGES IN TERTIARY STRUCTURE
Descriptor: HEMOGLOBIN BETA 4 (DEOXY), PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Borgstahl, G.E.O, Arnone, A.
Deposit date:1993-02-18
Release date:1994-07-31
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.9 A structure of deoxy beta 4 hemoglobin. Analysis of the partitioning of quaternary-associated and ligand-induced changes in tertiary structure.
J.Mol.Biol., 236, 1994
1CBM
DownloadVisualize
BU of 1cbm by Molmil
THE 1.8 ANGSTROM STRUCTURE OF CARBONMONOXY-BETA4 HEMOGLOBIN: ANALYSIS OF A HOMOTETRAMER WITH THE R QUATERNARY STRUCTURE OF LIGANDED ALPHA2BETA2 HEMOGLOBIN
Descriptor: CARBON MONOXIDE, HEMOGLOBIN BETA 4 (CARBONMONOXY), PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Borgstahl, G.E.O, Arnone, A.
Deposit date:1993-02-18
Release date:1994-07-31
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The 1.8 A structure of carbonmonoxy-beta 4 hemoglobin. Analysis of a homotetramer with the R quaternary structure of liganded alpha 2 beta 2 hemoglobin.
J.Mol.Biol., 236, 1994
1D5N
DownloadVisualize
BU of 1d5n by Molmil
CRYSTAL STRUCTURE OF E. COLI MNSOD AT 100K
Descriptor: MANGANESE (II) ION, PROTEIN (MANGANESE SUPEROXIDE DISMUTASE)
Authors:Borgstahl, G.E.O, Pokross, M, Chehab, R, Sekher, A, Snell, E.H.
Deposit date:1999-10-08
Release date:2000-03-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Cryo-trapping the six-coordinate, distorted-octahedral active site of manganese superoxide dismutase.
J.Mol.Biol., 296, 2000
1VAR
DownloadVisualize
BU of 1var by Molmil
MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE VARIANT WITH ILE 58 REPLACED BY THR
Descriptor: MANGANESE (III) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Borgstahl, G.E.O, Parge, H.E, Tainer, J.A.
Deposit date:1996-01-04
Release date:1996-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human mitochondrial manganese superoxide dismutase polymorphic variant Ile58Thr reduces activity by destabilizing the tetrameric interface.
Biochemistry, 35, 1996
1AP5
DownloadVisualize
BU of 1ap5 by Molmil
TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Borgstahl, G.E.O, Tainer, J.A.
Deposit date:1997-07-24
Release date:1998-01-28
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34.
Biochemistry, 37, 1998
3K9S
DownloadVisualize
BU of 3k9s by Molmil
Crystal structure of the peroxide-bound manganese superoxide dismutase.
Descriptor: HYDROGEN PEROXIDE, MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Porta, J.C, Vahedi-Faridi, A, Borgstahl, G.E.O.
Deposit date:2009-10-16
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Analysis of Peroxide-Soaked MnSOD Crystals Reveals Side-On Binding of Peroxide to Active-Site Manganese.
J.Mol.Biol., 399, 2010
4F95
DownloadVisualize
BU of 4f95 by Molmil
Crystal structure of human inosine triphosphate pyrophosphatase P32T variant
Descriptor: Inosine triphosphate pyrophosphatase
Authors:Simone, P.D, Pavlov, Y.I, Borgstahl, G.E.O.
Deposit date:2012-05-18
Release date:2013-04-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The human ITPA polymorphic variant P32T is destabilized by the unpacking of the hydrophobic core.
J.Struct.Biol., 182, 2013
2PYP
DownloadVisualize
BU of 2pyp by Molmil
PHOTOACTIVE YELLOW PROTEIN, PHOTOSTATIONARY STATE, 50% GROUND STATE, 50% BLEACHED
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Genick, U.K, Borgstahl, G.E.O, Ng, K, Ren, Z, Pradervand, C, Burke, P, Srajer, V, Teng, T, Schildkamp, W, Mcree, D.E, Moffat, K, Getzoff, E.D.
Deposit date:1997-02-03
Release date:1998-04-29
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a protein photocycle intermediate by millisecond time-resolved crystallography.
Science, 275, 1997
2NYB
DownloadVisualize
BU of 2nyb by Molmil
Crystal structure of E.Coli Iron Superoxide Dismutase Q69E at 1.1 Angstrom resolution
Descriptor: FE (II) ION, OXYGEN ATOM, Superoxide dismutase [FE]
Authors:Porta, J.C, Vahedi-Faridi, A, Borgstahl, G.E.O.
Deposit date:2006-11-20
Release date:2006-12-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:How Can a Single Second Sphere Amino Acid Substitution Cause Reduction Midpoint Potential Changes of Hundreds of Millivolts?
J.Am.Chem.Soc., 129, 2007

 

12>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon