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1I4V
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BU of 1i4v by Molmil
SOLUTION STRUCTURE OF THE UMUD' HOMODIMER
Descriptor: UMUD' PROTEIN
Authors:Ferentz, A.E, Walker, G.C, Wagner, G.
Deposit date:2001-02-23
Release date:2001-08-22
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).
EMBO J., 20, 2001
2ISJ
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BU of 2isj by Molmil
BluB bound to oxidized FMN
Descriptor: BluB, FLAVIN MONONUCLEOTIDE
Authors:Larsen, N.A, Taga, M.E, Howard-Jones, A.R, Walsh, C.T, Walker, G.C.
Deposit date:2006-10-17
Release date:2007-03-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:BluB cannibalizes flavin to form the lower ligand of vitamin B12.
Nature, 446, 2007
2ISL
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BU of 2isl by Molmil
BluB bound to reduced flavin (FMNH2) and molecular oxygen. (clear crystal form)
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, BluB, OXYGEN MOLECULE
Authors:Larsen, N.A, Taga, M.E, Howard-Jones, A.R, Walsh, C.T, Walker, G.C.
Deposit date:2006-10-17
Release date:2007-03-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:BluB cannibalizes flavin to form the lower ligand of vitamin B12.
Nature, 446, 2007
2ISK
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BU of 2isk by Molmil
BluB bound to flavin anion (charge transfer complex)
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, BluB
Authors:Larsen, N.A, Taga, M.E, Howard-Jones, A.R, Walsh, C.T, Walker, G.C.
Deposit date:2006-10-17
Release date:2007-03-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:BluB cannibalizes flavin to form the lower ligand of vitamin B12.
Nature, 446, 2007
4FJO
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BU of 4fjo by Molmil
Structure of the Rev1 CTD-Rev3/7-Pol kappa RIR complex
Descriptor: DNA polymerase kappa, DNA polymerase zeta catalytic subunit, DNA repair protein REV1, ...
Authors:Wojtaszek, J, Lee, C.-J, Zhou, P.
Deposit date:2012-06-11
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.718 Å)
Cite:Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric Pol zeta and Pol kappa
J.Biol.Chem., 287, 2012
7P34
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BU of 7p34 by Molmil
Cryo-EM structure of the proton-dependent antibacterial peptide transporter SbmA-FabS11-1 in nanodiscs
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Peptide antibiotic transporter SbmA
Authors:Ghilarov, D, Beis, K.
Deposit date:2021-07-07
Release date:2021-09-15
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Molecular mechanism of SbmA, a promiscuous transporter exploited by antimicrobial peptides.
Sci Adv, 7, 2021
6C8C
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BU of 6c8c by Molmil
Chimeric Pol kappa RIR Rev1 C-terminal domain in complex with JHRE06
Descriptor: 8-chloro-2-[(2,4-dichlorophenyl)amino]-3-(3-methylbutanoyl)-5-nitroquinolin-4(1H)-one, Chimeric protein of the Pol Kappa RIR helix and the Rev1 C-terminal domain
Authors:Najeeb, J, Zhou, P.
Deposit date:2018-01-24
Release date:2019-06-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy.
Cell, 178, 2019
6C59
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BU of 6c59 by Molmil
Chimeric Pol kappa RIR Rev1 C-terminal domain
Descriptor: ACETATE ION, Chimeric Pol kappa RIR Rev1 C-terminal domain
Authors:Wojtaszek, J.L, Zhou, P.
Deposit date:2018-01-15
Release date:2019-06-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy.
Cell, 178, 2019
2KHU
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BU of 2khu by Molmil
Solution Structure of the Ubiquitin-Binding Motif of Human Polymerase Iota
Descriptor: Immunoglobulin G-binding protein G, DNA polymerase iota
Authors:Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G.
Deposit date:2009-04-11
Release date:2010-02-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Unconventional Ubiquitin Recognition by the Ubiquitin-Binding Motif within the Y Family DNA Polymerases iota and Rev1.
Mol.Cell, 37, 2010
6BCD
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BU of 6bcd by Molmil
Crystal structure of Rev7-K44A/R124A/A135D in complex with Rev3-RBM2 (residues 1988-2014)
Descriptor: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
Authors:Rizzo, A.A, Hao, B, Li, Y, Korzhnev, D.M.
Deposit date:2017-10-20
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Rev7 dimerization is important for assembly and function of the Rev1/Pol zeta translesion synthesis complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BC8
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BU of 6bc8 by Molmil
Crystal structure of Rev7-R124A/Rev3-RBM2 (residues 1988-2014) complex
Descriptor: ACETATE ION, DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B, ...
Authors:Rizzo, A.A, Hao, B, Li, Y, Korzhnev, D.M.
Deposit date:2017-10-20
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Rev7 dimerization is important for assembly and function of the Rev1/Pol zeta translesion synthesis complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BI7
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BU of 6bi7 by Molmil
Crystal structure of Rev7-WT/Rev3 as a monomer under high-salt conditions
Descriptor: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
Authors:Rizzo, A.A, Korzhnev, D.M, Hao, B, Li, Y.
Deposit date:2017-11-01
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Rev7 dimerization is important for assembly and function of the Rev1/Pol zeta translesion synthesis complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3GAB
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BU of 3gab by Molmil
C-terminal domain of Bacillus subtilis MutL crystal form I
Descriptor: DNA mismatch repair protein mutL
Authors:Guarne, A, Pillon, M.C, Lorenowicz, J.J, Mitchell, R.R, Chung, Y.S, Friedhoff, P.
Deposit date:2009-02-17
Release date:2010-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
3KDK
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BU of 3kdk by Molmil
Structure of the C-terminal domain of Bacillus subtilis MutL bound to Zn2+
Descriptor: DNA mismatch repair protein mutL, ZINC ION
Authors:Guarne, A, Pillon, M.C.
Deposit date:2009-10-23
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
3KDG
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BU of 3kdg by Molmil
C-terminal domain of Bacillus subtilis MutL crystal form II
Descriptor: DNA mismatch repair protein mutL
Authors:Guarne, A, Pillon, M.C.
Deposit date:2009-10-22
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
2LSJ
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BU of 2lsj by Molmil
Solution structure of the mouse Rev1 CTD in complex with the Rev1-interacting Region (RIR)of Pol Kappa
Descriptor: DNA polymerase kappa, DNA repair protein REV1
Authors:Liu, J, Wojtaszek, J, Zhou, P.
Deposit date:2012-05-01
Release date:2012-06-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Multifaceted recognition of vertebrate Rev1 by translesion polymerases zeta and kappa.
J.Biol.Chem., 287, 2012
2LSK
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BU of 2lsk by Molmil
C-terminal domain of human REV1 in complex with DNA-polymerase H (eta)
Descriptor: DNA polymerase eta, DNA repair protein REV1
Authors:Pozhidaeva, A, Pustovalova, Y, Bezsonova, I, Korzhnev, D.
Deposit date:2012-05-01
Release date:2012-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure and dynamics of the C-terminal domain from human Rev1 and its complex with Rev1 interacting region of DNA polymerase eta.
Biochemistry, 51, 2012
2LSY
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BU of 2lsy by Molmil
Structure of the C-terminal domain from human REV1
Descriptor: DNA repair protein REV1
Authors:Pozhidaeva, A, Pustovalova, Y, Bezsonova, I, Korzhnev, D.
Deposit date:2012-05-09
Release date:2012-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure and dynamics of the C-terminal domain from human Rev1 and its complex with Rev1 interacting region of DNA polymerase eta.
Biochemistry, 51, 2012
2LSG
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BU of 2lsg by Molmil
Solution structure of the mouse Rev1 C-terminal domain
Descriptor: DNA repair protein REV1
Authors:Liu, J, Wojtaszek, J, Zhou, P.
Deposit date:2012-04-30
Release date:2012-06-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Multifaceted recognition of vertebrate Rev1 by translesion polymerases zeta and kappa.
J.Biol.Chem., 287, 2012
2N1G
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BU of 2n1g by Molmil
Structure of C-terminal domain of human polymerase Rev1 in complex with PolD3 RIR-motif
Descriptor: DNA polymerase delta subunit 3, DNA repair protein REV1
Authors:Pustovalova, Y, Korzhnev, D.
Deposit date:2015-04-01
Release date:2016-04-13
Last modified:2016-04-20
Method:SOLUTION NMR
Cite:Interaction between the Rev1 C-Terminal Domain and the PolD3 Subunit of Pol zeta Suggests a Mechanism of Polymerase Exchange upon Rev1/Pol zeta-Dependent Translesion Synthesis.
Biochemistry, 55, 2016

217705

PDB entries from 2024-03-27

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