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8R2C
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BU of 8r2c by Molmil
Crystal structure of the Vint domain from Tetrahymena thermophila
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, von willebrand factor type A (VWA) domain was originally protein
Authors:Iwai, H, Beyer, H.M, Johannson, J.E, Li, M, Wlodawer, A.
Deposit date:2023-11-03
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The three-dimensional structure of the Vint domain from Tetrahymena thermophila suggests a ligand-regulated cleavage mechanism by the HINT fold.
Febs Lett., 2024
1VD0
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BU of 1vd0 by Molmil
Capsid stabilizing protein GPD, NMR, 20 Structures
Descriptor: Head decoration protein
Authors:Iwai, H, Forrer, P, Pluckthun, A, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-17
Release date:2005-03-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR solution structure of the monomeric form of the bacteriophage lambda capsid stabilizing protein gpD.
J.Biomol.Nmr, 31, 2005
1SQ8
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BU of 1sq8 by Molmil
a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES
Descriptor: dh434
Authors:Iwai, H, Wider, G, Wuthrich, K.
Deposit date:2004-03-18
Release date:2004-07-20
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR Structure of a Variant 434 Repressor DNA-binding Domain Devoid of Hydroxyl Groups
J.Biomol.Nmr, 29, 2004
8RD6
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BU of 8rd6 by Molmil
the C-terminal domain of TonB protein from Salmonella enterica.
Descriptor: Protein TonB
Authors:Iwai, H, Ciragan, A, Oeemig, J.S.
Deposit date:2023-12-07
Release date:2024-01-17
Method:SOLUTION NMR
Cite:The 100-protein NMR spectra dataset: A resource for biomolecular NMR data analysis.
Sci Data, 11, 2024
5O9I
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BU of 5o9i by Molmil
Crystal structure of transcription factor IIB Mvu mini-intein
Descriptor: Transcription initiation factor IIB,Transcription initiation factor IIB
Authors:Mikula, K.M, Iwai, H, Li, M, Wlodawer, A.
Deposit date:2017-06-19
Release date:2017-11-01
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
5O9J
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BU of 5o9j by Molmil
Crystal structure of transcription factor IIB Mja mini-intein
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, ...
Authors:Mikula, K.M, Iwai, H, Zhou, D, Wlodawer, A.
Deposit date:2017-06-19
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
7OEC
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BU of 7oec by Molmil
Crystal structure of an intein from a hyperthermophile
Descriptor: DI(HYDROXYETHYL)ETHER, DNA polymerase II large subunit, SULFATE ION, ...
Authors:Hannes, B, Hiltunen, M, Iwai, H.
Deposit date:2021-05-03
Release date:2021-05-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Mini-Intein Structures from Extremophiles Suggest a Strategy for Finding Novel Robust Inteins.
Microorganisms, 9, 2021
6SLY
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BU of 6sly by Molmil
NMR solution structure of Helicobacter pylori TonB-CTD (residues 179-285)
Descriptor: Protein TonB
Authors:Ciragan, A, Heikkinen, H.A, Iwai, H.
Deposit date:2019-08-21
Release date:2020-03-25
Last modified:2024-02-28
Method:SOLUTION NMR
Cite:NMR Structure and Dynamics of TonB Investigated by Scar-Less Segmental Isotopic Labeling Using a Salt-Inducible Split Intein.
Front Chem, 8, 2020
7QSU
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BU of 7qsu by Molmil
Crystal structure of homing endonuclease-associated TliVMA intein (C1A, d333-339)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, V-ATPase
Authors:Beyer, H.M, Iwai, H.
Deposit date:2022-01-14
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
7QST
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BU of 7qst by Molmil
Crystal structure of homing endonuclease-associated PhoVMA intein (C1A)
Descriptor: CADMIUM ION, NICKEL (II) ION, V-type ATP synthase subunit A
Authors:Beyer, H.M, Iwai, H.
Deposit date:2022-01-14
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
7QSS
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BU of 7qss by Molmil
Crystal structure of homing endonuclease-associated TliVMA intein (C1A)
Descriptor: FORMIC ACID, V-type ATP synthase alpha chain
Authors:Beyer, H.M, Iwai, H.
Deposit date:2022-01-14
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
7QIL
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BU of 7qil by Molmil
Solution NMR structure of halophilic DnaE intein
Descriptor: DnaE intein
Authors:Heikkinen, H.A, Aranko, S.A, Iwai, H.
Deposit date:2021-12-15
Release date:2022-04-27
Method:SOLUTION NMR
Cite:The NMR structure of the engineered halophilic DnaE intein for segmental isotopic labeling using conditional protein splicing.
J.Magn.Reson., 338, 2022
8BD2
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BU of 8bd2 by Molmil
Calcium-bound Calmodulin variant G113R
Descriptor: CALCIUM ION, Calmodulin-3
Authors:Wimmer, R, Holler, C.V, Petersson, N.M, Iwai, H, Niemelae, M.A, Brohus, M, Overgaard, M.T.
Deposit date:2022-10-18
Release date:2023-11-08
Last modified:2024-01-17
Method:SOLUTION NMR
Cite:Allosteric changes in protein stability and dynamics as pathogenic mechanism for calmodulin variants not affecting Ca 2+ coordinating residues.
Cell Calcium, 117, 2023
8BFG
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BU of 8bfg by Molmil
Solution structure of human apo/Calmodulin G113R (G114R)
Descriptor: Calmodulin-1
Authors:Wimmer, R, Holler, C.V, Petersson, N.M, Brohus, M.B, Niemelae, M, Overgaard, M.T, Iwai, H.
Deposit date:2022-10-25
Release date:2023-10-04
Last modified:2024-01-17
Method:SOLUTION NMR
Cite:Allosteric changes in protein stability and dynamics as pathogenic mechanism for calmodulin variants not affecting Ca 2+ coordinating residues.
Cell Calcium, 117, 2023
6SOW
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BU of 6sow by Molmil
NMR solution structure of staphylococcal protein A, C domain
Descriptor: Immunoglobulin G binding protein A
Authors:Backlund, S.M, Iwai, H.
Deposit date:2019-08-30
Release date:2020-09-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR Structure Determinations of Small Proteins Using only One Fractionally 20% 13 C- and Uniformly 100% 15 N-Labeled Sample.
Molecules, 26, 2021
1KP5
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BU of 1kp5 by Molmil
Cyclic Green Fluorescent Protein
Descriptor: Green Fluorescent Protein, SULFATE ION
Authors:Hofmann, A, Iwai, H, Plueckthun, A, Wlodawer, A.
Deposit date:2001-12-28
Release date:2002-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of cyclized green fluorescent protein.
Acta Crystallogr.,Sect.D, 58, 2002
6FFU
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BU of 6ffu by Molmil
Solution NMR structure of CBM64 from S.thermophila using 20% 13C, 100% 15N
Descriptor: Glycosyl hydrolase family 5 cellulase CBM64
Authors:Heikkinen, H.A, Iwai, H.
Deposit date:2018-01-09
Release date:2019-01-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR Structure Determinations of Small Proteins Using only One Fractionally 20% 13 C- and Uniformly 100% 15 N-Labeled Sample.
Molecules, 26, 2021
6FIP
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BU of 6fip by Molmil
Solution NMR structure of Pseudomonas aeruginosa TonB CTD
Descriptor: Protein TonB
Authors:Oeemig, J.S, Samuli Ollila, O.H, Heikkinen, H.A, Iwai, H.
Deposit date:2018-01-19
Release date:2018-08-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure of the C-terminal domain of TonB protein fromPseudomonas aeruginosa.
PeerJ, 6, 2018
6FFQ
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BU of 6ffq by Molmil
Solution NMR structure of CBM64 from S.thermophila
Descriptor: Glycosyl hydrolase family 5 cellulase CBM64
Authors:Heikkinen, H.A, Iwai, H.
Deposit date:2018-01-09
Release date:2019-01-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR Structure Determinations of Small Proteins Using only One Fractionally 20% 13 C- and Uniformly 100% 15 N-Labeled Sample.
Molecules, 26, 2021
5OBN
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BU of 5obn by Molmil
NMR solution structure of U11/U12 65K protein's C-terminal RRM domain (381-516)
Descriptor: RNA-binding protein 40
Authors:Norppa, A.J, Kauppala, T.M, Heikkinen, H.A, Verma, B, Iwai, H, Frilander, M.J.
Deposit date:2017-06-28
Release date:2018-01-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Mutations in the U11/U12-65K protein associated with isolated growth hormone deficiency lead to structural destabilization and impaired binding of U12 snRNA.
RNA, 24, 2018
1OAV
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BU of 1oav by Molmil
OMEGA-AGATOXIN IVA
Descriptor: OMEGA-AGATOXIN IVA
Authors:Kim, J.I, Konishi, S, Iwai, H, Kohno, T, Gouda, H, Shimada, I, Sato, K, Arata, Y.
Deposit date:1995-06-28
Release date:1995-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the calcium channel antagonist omega-agatoxin IVA: consensus molecular folding of calcium channel blockers.
J.Mol.Biol., 250, 1995
1OAW
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BU of 1oaw by Molmil
OMEGA-AGATOXIN IVA
Descriptor: OMEGA-AGATOXIN IVA
Authors:Kim, J.I, Konishi, S, Iwai, H, Kohno, T, Gouda, H, Shimada, I, Sato, K, Arata, Y.
Deposit date:1995-06-28
Release date:1995-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the calcium channel antagonist omega-agatoxin IVA: consensus molecular folding of calcium channel blockers.
J.Mol.Biol., 250, 1995
5LW8
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BU of 5lw8 by Molmil
NMR solution structure of Helicobacter pylori TonB-CTD (residues 194-285)
Descriptor: Protein TonB
Authors:Ciragan, A, Aranko, A.S, Tascon, I, Iwai, H.
Deposit date:2016-09-15
Release date:2016-10-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Salt-inducible Protein Splicing in cis and trans by Inteins from Extremely Halophilic Archaea as a Novel Protein-Engineering Tool.
J.Mol.Biol., 428, 2016
5N2N
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BU of 5n2n by Molmil
Crystal structure of the receiver domain of the histidine kinase CKI1 from Arabidopsis thaliana complexed with Mg2+ and BeF3-
Descriptor: BERYLLIUM TRIFLUORIDE ION, Histidine kinase CKI1, MAGNESIUM ION
Authors:Otrusinova, O, Demo, G, Padrta, P, Jasenakova, Z, Pekarova, B, Gelova, Z, Szmitkowska, A, Kaderavek, P, Jansen, S, Zachrdla, M, Klumpler, T, Marek, J, Hritz, J, Janda, L, Iwai, H, Wimmerova, M, Hejatko, J, Zidek, L.
Deposit date:2017-02-08
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana.
J. Biol. Chem., 292, 2017
2M4F
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BU of 2m4f by Molmil
Solution Structure of Outer surface protein E
Descriptor: Outer surface protein E
Authors:Bhattacharjee, A, Oeemig, J.S, Kolodziejczyk, R, Meri, T, Kajander, T, Iwai, H, Jokiranta, T, Goldman, A.
Deposit date:2013-02-05
Release date:2013-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis for Complement Evasion by Lyme Disease Pathogen Borrelia burgdorferi
J.Biol.Chem., 288, 2013

 

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