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1AF7
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BU of 1af7 by Molmil
CHER FROM SALMONELLA TYPHIMURIUM
Descriptor: CHEMOTAXIS RECEPTOR METHYLTRANSFERASE CHER, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Djordjevic, S, Stock, A.M.
Deposit date:1997-03-22
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the chemotaxis receptor methyltransferase CheR suggests a conserved structural motif for binding S-adenosylmethionine.
Structure, 5, 1997
1A2O
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BU of 1a2o by Molmil
STRUCTURAL BASIS FOR METHYLESTERASE CHEB REGULATION BY A PHOSPHORYLATION-ACTIVATED DOMAIN
Descriptor: CHEB METHYLESTERASE
Authors:Djordjevic, S, Goudreau, P.N, Xu, Q, Stock, A.M, West, A.H.
Deposit date:1998-01-06
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain.
Proc.Natl.Acad.Sci.USA, 95, 1998
1BC5
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BU of 1bc5 by Molmil
CHEMOTAXIS RECEPTOR RECOGNITION BY PROTEIN METHYLTRANSFERASE CHER
Descriptor: CHEMOTAXIS RECEPTOR, CHEMOTAXIS RECEPTOR METHYLTRANSFERASE, COBALT (II) ION, ...
Authors:Djordjevic, S, Stock, A.M.
Deposit date:1998-05-05
Release date:1998-11-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chemotaxis receptor recognition by protein methyltransferase CheR.
Nat.Struct.Biol., 5, 1998
7O1N
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BU of 7o1n by Molmil
Crystal Structure of Human Neuropilin-1 b1 Domain mutant - Y297A
Descriptor: Neuropilin-1
Authors:Djordjevic, S, Chandanani, J, Faleeva, M, Pinotsis, N.
Deposit date:2021-03-29
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal Structure of Human Neuropilin-1 b1 Domain mutant - Y297A
To Be Published
1BUC
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BU of 1buc by Molmil
THREE-DIMENSIONAL STRUCTURE OF BUTYRYL-COA DEHYDROGENASE FROM MEGASPHAERA ELSDENII
Descriptor: ACETOACETYL-COENZYME A, BUTYRYL-COA DEHYDROGENASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Djordjevic, S, Pace, C.P, Stankovich, M.T, Kim, J.J.P.
Deposit date:1994-09-06
Release date:1995-04-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of butyryl-CoA dehydrogenase from Megasphaera elsdenii.
Biochemistry, 34, 1995
6ESK
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BU of 6esk by Molmil
Structure of the apo form of AioX from Rhizobium sp. str. NT-26
Descriptor: GLYCEROL, Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
Authors:Djordjevic, S, Badilla, C, Cole, A, Santini, J.
Deposit date:2017-10-20
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A new family of periplasmic-binding proteins that sense arsenic oxyanions.
Sci Rep, 8, 2018
6EU7
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BU of 6eu7 by Molmil
Structure of the arsenite-bound form of AioX from Rhizobium sp. str. NT-26
Descriptor: Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
Authors:Djordjevic, S, Badilla, C, Cole, A, Santini, J.
Deposit date:2017-10-28
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:A new family of periplasmic-binding proteins that sense arsenic oxyanions.
Sci Rep, 8, 2018
6ESV
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BU of 6esv by Molmil
Structure of the phosphate-bound form of AioX from Rhizobium sp. str. NT-26
Descriptor: PHOSPHATE ION, Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
Authors:Djordjevic, S, Badilla, C, Cole, A, Santini, J.
Deposit date:2017-10-24
Release date:2018-10-17
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A new family of periplasmic-binding proteins that sense arsenic oxyanions.
Sci Rep, 8, 2018
1J04
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BU of 1j04 by Molmil
Structural mechanism of enzyme mistargeting in hereditary kidney stone disease in vitro
Descriptor: (AMINOOXY)ACETIC ACID, GLYCEROL, alanine--glyoxylate aminotransferase
Authors:Zhang, X, Djordjevic, S, Bartlam, M, Ye, S, Rao, Z, Danpure, C.J.
Deposit date:2002-10-30
Release date:2003-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural implications of a G170R mutation of alanine:glyoxylate aminotransferase that is associated with peroxisome-to-mitochondrion mistargeting.
Acta Crystallogr.,Sect.F, 66, 2010
3E0U
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BU of 3e0u by Molmil
Crystal structure of T. cruzi GPX1
Descriptor: AMMONIUM ION, GLYCEROL, Glutathione peroxidase
Authors:Patel, S.H, Hussain, S, Harris, R, Driscoll, P, Djordjevic, S.
Deposit date:2008-08-01
Release date:2009-08-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the catalytic mechanism of Trypanosoma cruzi GPXI (glutathione peroxidase-like enzyme I).
Biochem.J., 425, 2010
4RN5
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BU of 4rn5 by Molmil
B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site
Descriptor: ACETATE ION, GLYCEROL, Neuropilin-1, ...
Authors:Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S.
Deposit date:2014-10-23
Release date:2015-10-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Conserved water molecules in a ligand-binding site of neuropilin-1
To be Published
5L73
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BU of 5l73 by Molmil
MAM domain of human neuropilin-1
Descriptor: BICINE, CALCIUM ION, Neuropilin-1, ...
Authors:Yelland, T, Djordjevic, S.
Deposit date:2016-06-01
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of the Neuropilin-1 MAM Domain: Completing the Neuropilin-1 Ectodomain Picture.
Structure, 24, 2016
1Q31
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BU of 1q31 by Molmil
Crystal Structure of the Tobacco Etch Virus Protease C151A mutant
Descriptor: BETA-MERCAPTOETHANOL, Nuclear inclusion protein A
Authors:Nunn, C.M, Djordjevic, S, George, R.R, Urquhart, G.T, Chao, L.H, Tsuchiya, Y.
Deposit date:2003-07-28
Release date:2004-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of tobacco etch virus protease shows the protein C terminus bound within the active site.
J.Mol.Biol., 350, 2005
3O7W
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BU of 3o7w by Molmil
The Crystal Structure of Human Leucine Carboxyl Methyltransferase 1
Descriptor: GLYCEROL, Leucine carboxyl methyltransferase 1, S-ADENOSYLMETHIONINE, ...
Authors:Tsai, M.L, Cronin, N, Djordjevic, S.
Deposit date:2010-08-01
Release date:2010-09-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of human leucine carboxyl methyltransferase 1 that regulates protein phosphatase PP2A
Acta Crystallogr.,Sect.D, 67, 2011
3I97
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BU of 3i97 by Molmil
B1 domain of human Neuropilin-1 bound with small molecule EG00229
Descriptor: (S)-2-(3-(benzo[c][1,2,5]thiadiazole-4-sulfonamido)thiophene-2-carboxamido)-5-guanidinopentanoic acid, GLYCEROL, Neuropilin-1
Authors:Allerston, C.K, Djordjevic, S.
Deposit date:2009-07-10
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Small molecule inhibitors of the neuropilin-1 vascular endothelial growth factor A (VEGF-A) interaction.
J.Med.Chem., 53, 2010
2I08
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BU of 2i08 by Molmil
Solvation effect in conformational changes of EF-hand proteins: X-ray structure of Ca2+-saturated double mutant Q41L-K75I of N-domain of calmodulin
Descriptor: CALCIUM ION, Calmodulin, GLYCEROL
Authors:Ababou, A, Parkinson, G.N, Desjarlais, J.R, Djordjevic, S.
Deposit date:2006-08-10
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Solvation effect in conformational changes of EF-hand proteins: X-ray structure of double mutant Q41L-K75I of N-domain of calmodulin
To be Published
6FMF
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BU of 6fmf by Molmil
Neuropilin-1 b1 domain in complex with EG01377; 2.8 Angstrom structure
Descriptor: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1, trifluoroacetic acid
Authors:Yelland, T, Djordjevic, S, Selwood, D, Zachary, I, Frankel, P.
Deposit date:2018-01-31
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.811 Å)
Cite:Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
6FMC
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BU of 6fmc by Molmil
Neuropilin1-b1 domain in complex with EG01377, 0.9 Angstrom structure
Descriptor: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1
Authors:Yelland, T, Djordjevic, S, Fotinou, K, Selwood, D, Zachary, I, Frankel, P.
Deposit date:2018-01-30
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
2AR5
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BU of 2ar5 by Molmil
Crystal structure of the mammalian C2alpha-PI3 Kinase PX-domain
Descriptor: GLYCEROL, Phosphoinositide 3-kinase
Authors:Parkinson, G.N, Vines, D, Driscoll, P.C, Djordjevic, S.
Deposit date:2005-08-19
Release date:2006-10-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ligand-binding specificity of PI3Kinase C2alpha PX domain.
To be Published
5DN2
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BU of 5dn2 by Molmil
Human NRP2 b1 domain in complex with the peptide corresponding to the C-terminus of VEGF-A
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, Neuropilin-2, ...
Authors:Tsai, Y.C.I, Frankel, P, Fotinou, C, Rana, R, Zachary, I, Djordjevic, S.
Deposit date:2015-09-09
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural studies of neuropilin-2 reveal a zinc ion binding site remote from the vascular endothelial growth factor binding pocket.
Febs J., 283, 2016
5DQ0
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BU of 5dq0 by Molmil
Structure of human neuropilin-2 b1 domain with novel and unique zinc binding site
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Tsai, Y.I, Rana, R.R, Zachary, I, Djordjevic, S.
Deposit date:2015-09-14
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human neuropilin-2 b1 domain with novel and unique zinc binding site
To Be Published
1LW1
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BU of 1lw1 by Molmil
Crystal Structure Of Mycobacterium Tuberculosis Alkylperoxidase Ahpd H137F mutant
Descriptor: ALKYLHYDROPEROXIDASE D
Authors:Nunn, C.M, Djordjevic, S, Ortiz de Montellano, P.R.
Deposit date:2002-05-30
Release date:2002-07-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Mechanism of Mycobacterium tuberculosis Alkylhydroperoxidase AhpD as Defined by Mutagenesis, Crystallography, and Kinetics
J.Biol.Chem., 278, 2003
1ME5
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BU of 1me5 by Molmil
Crystal Structure of Mycobacterium Tuberculosis Alkylperoxidase AhpD H132Q Mutant
Descriptor: ALKYLHYDROPEROXIDASE D
Authors:Nunn, C.M, Djordjevic, S, Ortiz de Montellano, P.R.
Deposit date:2002-08-08
Release date:2002-09-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The mechanism of Mycobacterium tuberculosis alkylhydroperoxidase AhpD as defined by mutagenesis, crystallography, and kinetics.
J.Biol.Chem., 278, 2003
6TDB
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BU of 6tdb by Molmil
Neuropilin2-b1 domain in a complex with the C-terminal VEGFB167 peptide
Descriptor: 1,2-ETHANEDIOL, ACETYL GROUP, C-terminal VEGFB167 peptide, ...
Authors:Eldrid, C, Yu, L, Yelland, T, Fotinou, C, Djordjevic, S.
Deposit date:2019-11-08
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:NRP2-b1 domain in a complex with the C-terminal VEGFB167 peptide
To Be Published
6TJT
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BU of 6tjt by Molmil
Neuropilin2-b1 domain in a complex with the C-terminal VEGFC peptide
Descriptor: 1,2-ETHANEDIOL, Neuropilin-2, SULFATE ION, ...
Authors:Eldrid, C, Yu, L, Yelland, T, Fotinou, C, Djordjevic, S.
Deposit date:2019-11-26
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:NRP2-b1 domain in a complex with the C-terminal VEGFC peptide
To Be Published

 

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