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2BHF
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BU of 2bhf by Molmil
3D structure of the reduced form of CotA
Descriptor: COPPER (I) ION, GLYCEROL, SPORE COAT PROTEIN A
Authors:Bento, I, Martins, L.O, Lopes, G.G, Carrondo, M.A, Lindley, P.F.
Deposit date:2005-01-10
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dioxygen Reduction by Multi-Copper Oxidases; a Structural Perspective.
Dalton Trans., 7, 2005
1UPD
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BU of 1upd by Molmil
Oxidized STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 AT PH 7.6
Descriptor: CYTOCHROME C3, HEME C
Authors:Bento, I, Matias, P.M, Baptista, A.M, Da Costa, P.N, Van Dongen, W.M.A.M, Saraiva, L.M, Schneider, T.R, Soares, C.M, Carrondo, M.A.
Deposit date:2003-09-29
Release date:2004-09-30
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular Basis for Redox-Bohr and Cooperative Effects in Cytochrome C3 from Desulfovibrio Desulfuricans Atcc 27774: Crystallographic and Modeling Studies of Oxidized and Reduced High-Resolution Structures at Ph 7.6
Proteins, 54, 2004
1UP9
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BU of 1up9 by Molmil
REDUCED STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 AT PH 7.6
Descriptor: CYTOCHROME C3, HEME C, SULFATE ION
Authors:Bento, I, Matias, P.M, Baptista, A.M, Da Costa, P.N, Van Dongen, W.M.A.M, Saraiva, L.M, Schneider, T.R, Soares, C.M, Carrondo, M.A.
Deposit date:2003-09-29
Release date:2004-09-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Molecular Basis for Redox-Bohr and Cooperative Effects in Cytochrome C3 from Desulfovibrio Desulfuricans Atcc 27774: Crystallographic and Modeling Studies of Oxidized and Reduced High-Resolution Structures at Ph 7.6
Proteins, 54, 2004
1OFW
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BU of 1ofw by Molmil
Three dimensional structure of the oxidized form of nine heme cytochrome c at PH 7.5
Descriptor: ACETATE ION, GLYCEROL, HEME C, ...
Authors:Bento, I, Teixeira, V.H, Baptista, A.M, Soares, C.M, Matias, P.M, Carrondo, M.A.
Deposit date:2003-04-22
Release date:2003-09-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Redox-Bohr and Other Cooperativity Effects in the Nine-Heme Cytochrome C from Desulfovibrio Desulfuricans Atcc 27774: Crystallographic and Modeling Studies
J.Biol.Chem., 278, 2003
1OFY
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BU of 1ofy by Molmil
three dimensional structure of the reduced form of nine-heme cytochrome c at ph 7.5
Descriptor: ACETATE ION, GLYCEROL, HEME C, ...
Authors:Bento, I, Teixeira, V.H, Baptista, A.M, Soares, C.M, Matias, P.M, Carrondo, M.A.
Deposit date:2003-04-22
Release date:2003-09-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Redox-Bohr and Other Cooperativity Effects in the Nine-Heme Cytochrome C from Desulfovibrio Desulfuricans Atcc 27774: Crystallographic and Modeling Studies
J.Biol.Chem., 278, 2003
2J5W
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BU of 2j5w by Molmil
Ceruloplasmin revisited: structural and functional roles of various metal cation binding sites
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CERULOPLASMIN, ...
Authors:Bento, I, Peixoto, C, Zaitsev, V.N, Lindley, P.F.
Deposit date:2006-09-19
Release date:2007-02-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ceruloplasmin Revisited: Structural and Functional Roles of Various Metal Cation-Binding Sites.
Acta Crystallogr.,Sect.D, 63, 2007
1W6W
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BU of 1w6w by Molmil
3D structure of CotA incubated with sodium azide
Descriptor: AZIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Bento, I, Martins, L.O, Lopes, G.G, Carrondo, M.A, Lindley, P.F.
Deposit date:2004-08-24
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dioxygen Reduction by Multi-Copper Oxidases; a Structural Perspective.
Dalton Trans., 7, 2005
1W8E
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BU of 1w8e by Molmil
3D structure of CotA incubated with hydrogen peroxide
Descriptor: COPPER (II) ION, GLYCEROL, PEROXIDE ION, ...
Authors:Bento, I, Martins, L.O, Lopes, G.G, Carrondo, M.A, Lindley, P.F.
Deposit date:2004-09-21
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dioxygen Reduction by Multi-Copper Oxidases; a Structural Perspective.
Dalton Trans., 7, 2005
1W6L
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BU of 1w6l by Molmil
3D structure of CotA incubated with CuCl2
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN MOLECULE, ...
Authors:Bento, I, Martins, L.O, Lopes, G.G, Carrondo, M.A, Lindley, P.F.
Deposit date:2004-08-19
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dioxygen Reduction by Multi-Copper Oxidases; a Structural Perspective.
Dalton Trans., 7, 2005
2X87
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BU of 2x87 by Molmil
Crystal Structure of the reconstituted CotA
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, HYDROXIDE ION, ...
Authors:Bento, I, Silva, C.S, Chen, Z, Martins, L.O, Lindley, P.F, Soares, C.M.
Deposit date:2010-03-06
Release date:2010-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanisms Underlying Dioxygen Reduction in Laccases. Structural and Modelling Studies Focusing on Proton Transfer.
Bmc Struct.Biol., 10, 2010
2X88
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BU of 2x88 by Molmil
Crystal Structure of HoloCotA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Bento, I, Silva, C.S, Chen, Z, Martins, L.O, Lindley, P.F, Soares, C.M.
Deposit date:2010-03-06
Release date:2010-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanisms Underlying Dioxygen Reduction in Laccases. Structural and Modelling Studies Focusing on Proton Transfer.
Bmc Struct.Biol., 10, 2010
1GMB
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BU of 1gmb by Molmil
Reduced structure of CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 at pH 7.6
Descriptor: CYTOCHROME C3, HEME C, SULFATE ION
Authors:Bento, I, Louro, R, Matias, P.M, Catarino, T, Baptista, A.M, Soares, C.M, Carrondo, M.A, Turner, D.L, Xavier, A.V.
Deposit date:2001-09-12
Release date:2002-09-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Component in the Coupled Transfer of Multiple Electrons and Protons in a Monomeric Tetraheme Cytochrome
J.Biol.Chem., 276, 2001
1GM4
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BU of 1gm4 by Molmil
OXIDISED STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 at pH 7.6
Descriptor: CYTOCHROME C3, HEME C, SULFATE ION
Authors:Bento, I, Louro, R, Matias, P.M, Catarino, T, Baptista, A.M, Soares, C.M, Carrondo, M.A, Turner, D.L, Xavier, A.V.
Deposit date:2001-09-10
Release date:2002-09-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational Component in the Coupled Transfer of Multiple Electrons and Protons in a Monomeric Tetraheme Cytochrome.
J.Biol.Chem., 276, 2001
8ATJ
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BU of 8atj by Molmil
Crystal Structure of Shank2-SAM domain
Descriptor: CHLORIDE ION, FORMIC ACID, Isoform 4 of SH3 and multiple ankyrin repeat domains protein 2, ...
Authors:Bento, I, Gracia Alai, M, Kreienkamp, J.-H.
Deposit date:2022-08-23
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:Structural deficits in key domains of Shank2 lead to alterations in postsynaptic nanoclusters and to a neurodevelopmental disorder in humans.
Mol Psychiatry, 2022
8B10
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BU of 8b10 by Molmil
Crystal Structure of Shank2-SAM mutant domain - L1800W
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bento, I, Gracia Alai, M, Kreienkamp, J.-H.
Deposit date:2022-09-08
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural deficits in key domains of Shank2 lead to alterations in postsynaptic nanoclusters and to a neurodevelopmental disorder in humans.
Mol Psychiatry, 2022
6ZJ4
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BU of 6zj4 by Molmil
apo-Trehalose transferase (apo-TreT) from Thermoproteus uzoniensis
Descriptor: THIOCYANATE ION, Trehalose phosphorylase/synthase
Authors:Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
Deposit date:2020-06-27
Release date:2020-09-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
Acs Catalysis, 10, 2020
6ZJ7
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BU of 6zj7 by Molmil
Trehalose transferase (TreT) from Thermoproteus uzoniensis soaked with Mg
Descriptor: GLYCEROL, TETRAETHYLENE GLYCOL, THIOCYANATE ION, ...
Authors:Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
Deposit date:2020-06-28
Release date:2020-09-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
Acs Catalysis, 10, 2020
6ZJH
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BU of 6zjh by Molmil
Trehalose transferase from Thermoproteus uzoniensis soaked with trehalose
Descriptor: GLYCEROL, Trehalose phosphorylase/synthase, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
Deposit date:2020-06-29
Release date:2020-11-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
Acs Catalysis, 10, 2020
6ZMZ
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BU of 6zmz by Molmil
UDPG-bound Trehalose transferase from Thermoproteus uzoniensis
Descriptor: DI(HYDROXYETHYL)ETHER, Trehalose phosphorylase/synthase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
Deposit date:2020-07-05
Release date:2020-09-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
Acs Catalysis, 10, 2020
6ZN1
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BU of 6zn1 by Molmil
Trehalose transferase bound to alpha-D-glucopyranosyl-beta-galactopyranose from Thermoproteus uzoniensis
Descriptor: DI(HYDROXYETHYL)ETHER, THIOCYANATE ION, Trehalose phosphorylase/synthase, ...
Authors:Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
Deposit date:2020-07-06
Release date:2021-01-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
ACS Catal, 10, 2020
7AWV
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BU of 7awv by Molmil
Azoreductase (AzoRo) from Rhodococcus opacus 1CP
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase, ...
Authors:Bento, I, Ngo, A, Qi, J, Juric, C, Tischler, D.
Deposit date:2020-11-09
Release date:2022-02-02
Last modified:2022-02-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of molecular basis that underlie enzymatic specificity of AzoRo from Rhodococcus opacus 1CP: A potential NADH:quinone oxidoreductase.
Arch.Biochem.Biophys., 717, 2022
1B5F
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BU of 1b5f by Molmil
NATIVE CARDOSIN A FROM CYNARA CARDUNCULUS L.
Descriptor: PROTEIN (CARDOSIN A), alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Frazao, C, Bento, I, Carrondo, M.A.
Deposit date:1999-01-06
Release date:1999-01-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of cardosin A, a glycosylated and Arg-Gly-Asp-containing aspartic proteinase from the flowers of Cynara cardunculus L.
J.Biol.Chem., 274, 1999
8ADQ
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BU of 8adq by Molmil
Crystal structure of holo-SwHPA-Mg (hydroxy ketone aldolase) from Sphingomonas wittichii RW1 in complex with hydroxypyruvate and D-Glyceraldehyde
Descriptor: 3-HYDROXYPYRUVIC ACID, BROMIDE ION, D-Glyceraldehyde, ...
Authors:Justo, I, Marsden, S.R, Hanefeld, U, Bento, I.
Deposit date:2022-07-11
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate Induced Movement of the Metal Cofactor between Active and Resting State.
Angew.Chem.Int.Ed.Engl., 61, 2022
6R62
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BU of 6r62 by Molmil
Crystal structure of a class II pyruvate aldolase from Sphingomonas wittichii RW1 in complex with hydroxypyruvate
Descriptor: 3-HYDROXYPYRUVIC ACID, ACETATE ION, BROMIDE ION, ...
Authors:Marsden, S.R, Mestrom, L, Hagedoorn, P.L, Bento, I, McMillan, D.G.G, Hanefeld, U.
Deposit date:2019-03-26
Release date:2019-05-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:CH-Pi Interactions Promote the Conversion of Hydroxypyruvate in a Class II Pyruvate Aldolase
Adv.Synth.Catal., 2019
2H5U
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BU of 2h5u by Molmil
Crystal structure of laccase from Cerrena maxima at 1.9A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lyashenko, A.V, Gabdoulkhakov, A.G, Zaitsev, V.N, Lamzin, V.S, Lindley, P.F, Bento, I, Betzel, C, Zhukhlistova, N.E, Zhukova, Y.N, Mikhailov, A.M.
Deposit date:2006-05-27
Release date:2007-05-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Purification, crystallization and preliminary X-ray study of the fungal laccase from Cerrena maxima
Acta Crystallogr.,Sect.F, 62, 2006

 

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